dbCAN Logo

Cluster: A111.bin_5_CGC57

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC A111_contig_1048 A111_contig_1048_2552 2996858 2997781 - 9.B.126.2.6
CAZyme A111_contig_1048 A111_contig_1048_2553 2997783 2999228 - GH13_5
NULL(UNKNOWN) A111_contig_1048 A111_contig_1048_2554 2999288 2999419 - NULL(UNKNOWN)
[View Structural Homologs]
TC A111_contig_1048 A111_contig_1048_2555 2999529 3000602 + 1.A.23.4.2
pfam A111_contig_1048 A111_contig_1048_2556 3000761 3002017 - His_Phos_2
TC A111_contig_1048 A111_contig_1048_2557 3002502 3002759 + 1.E.43.1.10
Gene ID: A111_contig_1048_2552
Type: TC
Location: 2996858 - 2997781 (-)
Gene ID: A111_contig_1048_2553
Type: CAZyme
Location: 2997783 - 2999228 (-)
Gene ID: A111_contig_1048_2554
Type:
Location: 2999288 - 2999419 (-)
Gene ID: A111_contig_1048_2555
Type: TC
Location: 2999529 - 3000602 (+)
Gene ID: A111_contig_1048_2556
Type: pfam
Location: 3000761 - 3002017 (-)
Gene ID: A111_contig_1048_2557
Type: TC
Location: 3002502 - 3002759 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
A111_contig_1048_2552 vegan > omnivore 1.83124 0.02242
A111_contig_1048_2553 vegan > omnivore 2.02103 0.01660
A111_contig_1048_2554 vegan > omnivore 2.17715 0.03622
A111_contig_1048_2555 vegan > omnivore 2.19538 0.03622
A111_contig_1048_2556 vegan > omnivore 2.24066 0.03622
A111_contig_1048_2557 vegan > omnivore 2.00817 0.03622

🧭 Explore Read Mapping of CGC

← Back to Cluster List