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Cluster: A111.bin_5_CGC53

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC A111_contig_1048 A111_contig_1048_2338 2758737 2759327 - 9.B.18.1.2
pfam A111_contig_1048 A111_contig_1048_2339 2759344 2760249 - LicD
CAZyme A111_contig_1048 A111_contig_1048_2340 2760256 2761080 - GT2
pfam A111_contig_1048 A111_contig_1048_2341 2761077 2762318 - Glyphos_transf
pfam A111_contig_1048 A111_contig_1048_2342 2762325 2763704 - adh_short | NTP_transferase | IspD | KR | NTP_transf_3 | adh_short_C2
CAZyme A111_contig_1048 A111_contig_1048_2343 2763710 2764582 - GT2
Gene ID: A111_contig_1048_2338
Type: TC
Location: 2758737 - 2759327 (-)
Gene ID: A111_contig_1048_2339
Type: pfam
Location: 2759344 - 2760249 (-)
Gene ID: A111_contig_1048_2340
Type: CAZyme
Location: 2760256 - 2761080 (-)
Gene ID: A111_contig_1048_2341
Type: pfam
Location: 2761077 - 2762318 (-)
Gene ID: A111_contig_1048_2342
Type: pfam
Location: 2762325 - 2763704 (-)
Gene ID: A111_contig_1048_2343
Type: CAZyme
Location: 2763710 - 2764582 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
A111_contig_1048_2338 vegan > omnivore 4.31602 0.01301
A111_contig_1048_2338 vegetarian > omnivore 3.07783 0.00341

🧭 Explore Read Mapping of CGC

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