Cluster: A111.bin_5_CGC4
🧬 Cluster Details
- Gene Count: 13
- CAZyme Count: 8
- Substrate:
- Genome ID: A111.bin_5
- CGC Family ID: CGCFAM_06551
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | A111_contig_1206 | A111_contig_1206_318 | 406134 | 408425 | + | GH3 |
| CAZyme | A111_contig_1206 | A111_contig_1206_319 | 408578 | 411229 | + | CBM57 | GH2 |
| sulfatase | A111_contig_1206 | A111_contig_1206_320 | 411277 | 412842 | + | S1_15 |
| CAZyme | A111_contig_1206 | A111_contig_1206_321 | 412890 | 414074 | + | GH172 |
| CAZyme | A111_contig_1206 | A111_contig_1206_322 | 414093 | 415244 | + | GH172 |
| TC | A111_contig_1206 | A111_contig_1206_323 | 415419 | 418424 | + | 1.B.14.6.1 |
| TC | A111_contig_1206 | A111_contig_1206_324 | 418450 | 419958 | + | 8.A.46.1.3 |
| CAZyme | A111_contig_1206 | A111_contig_1206_325 | 420026 | 421357 | + | GH144 |
| pfam | A111_contig_1206 | A111_contig_1206_326 | 421420 | 422271 | + | Exo_endo_phos |
| CAZyme | A111_contig_1206 | A111_contig_1206_327 | 422283 | 424553 | + | GH3 |
| sulfatase | A111_contig_1206 | A111_contig_1206_328 | 424587 | 426152 | + | S1_11 |
| CAZyme | A111_contig_1206 | A111_contig_1206_329 | 426209 | 427942 | + | CBM32 | GH43_28 |
| CAZyme | A111_contig_1206 | A111_contig_1206_330 | 428037 | 429773 | + | CBM32 | GH43_28 |
Gene ID: A111_contig_1206_318
Type: CAZyme
Location: 406134 - 408425 (+)
Type: CAZyme
Location: 406134 - 408425 (+)
Gene ID: A111_contig_1206_319
Type: CAZyme
Location: 408578 - 411229 (+)
Type: CAZyme
Location: 408578 - 411229 (+)
Gene ID: A111_contig_1206_320
Type: sulfatase
Location: 411277 - 412842 (+)
Type: sulfatase
Location: 411277 - 412842 (+)
Gene ID: A111_contig_1206_321
Type: CAZyme
Location: 412890 - 414074 (+)
Type: CAZyme
Location: 412890 - 414074 (+)
Gene ID: A111_contig_1206_322
Type: CAZyme
Location: 414093 - 415244 (+)
Type: CAZyme
Location: 414093 - 415244 (+)
Gene ID: A111_contig_1206_323
Type: TC
Location: 415419 - 418424 (+)
Type: TC
Location: 415419 - 418424 (+)
Gene ID: A111_contig_1206_324
Type: TC
Location: 418450 - 419958 (+)
Type: TC
Location: 418450 - 419958 (+)
Gene ID: A111_contig_1206_325
Type: CAZyme
Location: 420026 - 421357 (+)
Type: CAZyme
Location: 420026 - 421357 (+)
Gene ID: A111_contig_1206_326
Type: pfam
Location: 421420 - 422271 (+)
Type: pfam
Location: 421420 - 422271 (+)
Gene ID: A111_contig_1206_327
Type: CAZyme
Location: 422283 - 424553 (+)
Type: CAZyme
Location: 422283 - 424553 (+)
Gene ID: A111_contig_1206_328
Type: sulfatase
Location: 424587 - 426152 (+)
Type: sulfatase
Location: 424587 - 426152 (+)
Gene ID: A111_contig_1206_329
Type: CAZyme
Location: 426209 - 427942 (+)
Type: CAZyme
Location: 426209 - 427942 (+)
Gene ID: A111_contig_1206_330
Type: CAZyme
Location: 428037 - 429773 (+)
Type: CAZyme
Location: 428037 - 429773 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Bacteroides
Species
Bacteroides uniformis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.