Cluster: A111.bin_5_CGC32
🧬 Cluster Details
- Gene Count: 12
- CAZyme Count: 3
- Substrate:
- Genome ID: A111.bin_5
- CGC Family ID: CGCFAM_01517
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | A111_contig_1048 | A111_contig_1048_989 | 1264061 | 1265296 | + | 3.B.1.1.2 |
| pfam | A111_contig_1048 | A111_contig_1048_990 | 1265387 | 1266661 | - | OEP | OEP |
| TC | A111_contig_1048 | A111_contig_1048_991 | 1266696 | 1269725 | - | 2.A.6.2.37 |
| TC | A111_contig_1048 | A111_contig_1048_992 | 1269776 | 1270819 | - | 3.A.1.122.1 |
| CAZyme | A111_contig_1048 | A111_contig_1048_993 | 1270986 | 1273304 | - | GH65 |
| TC | A111_contig_1048 | A111_contig_1048_994 | 1273626 | 1274999 | - | 2.A.2.6.2 |
| TF | A111_contig_1048 | A111_contig_1048_995 | 1275019 | 1276023 | - | LacI |
| CAZyme | A111_contig_1048 | A111_contig_1048_996 | 1276239 | 1277414 | + | GH53 |
| CAZyme | A111_contig_1048 | A111_contig_1048_997 | 1277443 | 1279920 | + | GH2 |
| NULL(UNKNOWN) | A111_contig_1048 | A111_contig_1048_998 | 1280246 | 1280494 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | A111_contig_1048 | A111_contig_1048_999 | 1280652 | 1283618 | + | 1.B.14.6.1 |
| TC | A111_contig_1048 | A111_contig_1048_1000 | 1283623 | 1285269 | + | 8.A.46.1.4 |
Gene ID: A111_contig_1048_989
Type: TC
Location: 1264061 - 1265296 (+)
Type: TC
Location: 1264061 - 1265296 (+)
Gene ID: A111_contig_1048_990
Type: pfam
Location: 1265387 - 1266661 (-)
Type: pfam
Location: 1265387 - 1266661 (-)
Gene ID: A111_contig_1048_991
Type: TC
Location: 1266696 - 1269725 (-)
Type: TC
Location: 1266696 - 1269725 (-)
Gene ID: A111_contig_1048_992
Type: TC
Location: 1269776 - 1270819 (-)
Type: TC
Location: 1269776 - 1270819 (-)
Gene ID: A111_contig_1048_993
Type: CAZyme
Location: 1270986 - 1273304 (-)
Type: CAZyme
Location: 1270986 - 1273304 (-)
Gene ID: A111_contig_1048_994
Type: TC
Location: 1273626 - 1274999 (-)
Type: TC
Location: 1273626 - 1274999 (-)
Gene ID: A111_contig_1048_995
Type: TF
Location: 1275019 - 1276023 (-)
Type: TF
Location: 1275019 - 1276023 (-)
Gene ID: A111_contig_1048_996
Type: CAZyme
Location: 1276239 - 1277414 (+)
Type: CAZyme
Location: 1276239 - 1277414 (+)
Gene ID: A111_contig_1048_997
Type: CAZyme
Location: 1277443 - 1279920 (+)
Type: CAZyme
Location: 1277443 - 1279920 (+)
Gene ID: A111_contig_1048_998
Type:
Location: 1280246 - 1280494 (-)
Type:
Location: 1280246 - 1280494 (-)
Gene ID: A111_contig_1048_999
Type: TC
Location: 1280652 - 1283618 (+)
Type: TC
Location: 1280652 - 1283618 (+)
Gene ID: A111_contig_1048_1000
Type: TC
Location: 1283623 - 1285269 (+)
Type: TC
Location: 1283623 - 1285269 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Bacteroides
Species
Bacteroides uniformis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.