Cluster: A111.bin_5_CGC27
🧬 Cluster Details
- Gene Count: 9
- CAZyme Count: 6
- Substrate:
- Genome ID: A111.bin_5
- CGC Family ID: CGCFAM_06550
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | A111_contig_1048 | A111_contig_1048_789 | 1011557 | 1012966 | + | 2.A.1.1.42 |
| CAZyme | A111_contig_1048 | A111_contig_1048_790 | 1012994 | 1015555 | + | GH116 |
| TC | A111_contig_1048 | A111_contig_1048_791 | 1015645 | 1018896 | + | 1.B.14.6.1 |
| TC | A111_contig_1048 | A111_contig_1048_792 | 1018909 | 1020399 | + | 8.A.46.1.4 |
| CAZyme | A111_contig_1048 | A111_contig_1048_793 | 1020483 | 1021679 | + | GH33 |
| CAZyme | A111_contig_1048 | A111_contig_1048_794 | 1021725 | 1022885 | + | GH172 |
| CAZyme | A111_contig_1048 | A111_contig_1048_795 | 1022923 | 1025532 | + | GH3 |
| CAZyme | A111_contig_1048 | A111_contig_1048_796 | 1025525 | 1027342 | + | GH20 |
| CAZyme | A111_contig_1048 | A111_contig_1048_797 | 1027368 | 1029923 | + | GH116 |
Gene ID: A111_contig_1048_789
Type: TC
Location: 1011557 - 1012966 (+)
Type: TC
Location: 1011557 - 1012966 (+)
Gene ID: A111_contig_1048_790
Type: CAZyme
Location: 1012994 - 1015555 (+)
Type: CAZyme
Location: 1012994 - 1015555 (+)
Gene ID: A111_contig_1048_791
Type: TC
Location: 1015645 - 1018896 (+)
Type: TC
Location: 1015645 - 1018896 (+)
Gene ID: A111_contig_1048_792
Type: TC
Location: 1018909 - 1020399 (+)
Type: TC
Location: 1018909 - 1020399 (+)
Gene ID: A111_contig_1048_793
Type: CAZyme
Location: 1020483 - 1021679 (+)
Type: CAZyme
Location: 1020483 - 1021679 (+)
Gene ID: A111_contig_1048_794
Type: CAZyme
Location: 1021725 - 1022885 (+)
Type: CAZyme
Location: 1021725 - 1022885 (+)
Gene ID: A111_contig_1048_795
Type: CAZyme
Location: 1022923 - 1025532 (+)
Type: CAZyme
Location: 1022923 - 1025532 (+)
Gene ID: A111_contig_1048_796
Type: CAZyme
Location: 1025525 - 1027342 (+)
Type: CAZyme
Location: 1025525 - 1027342 (+)
Gene ID: A111_contig_1048_797
Type: CAZyme
Location: 1027368 - 1029923 (+)
Type: CAZyme
Location: 1027368 - 1029923 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Bacteroides
Species
Bacteroides uniformis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| A111_contig_1048_789 | vegan > omnivore | 1.13866 | 0.03622 |
| A111_contig_1048_790 | vegan > omnivore | 1.65990 | 0.02242 |
| A111_contig_1048_791 | vegan > omnivore | 1.49860 | 0.02242 |
| A111_contig_1048_792 | vegan > omnivore | 1.27685 | 0.02409 |
| A111_contig_1048_793 | vegan > omnivore | 1.44137 | 0.02318 |
| A111_contig_1048_794 | vegan > omnivore | 1.59055 | 0.02876 |
| A111_contig_1048_795 | vegan > omnivore | 1.53777 | 0.03622 |
| A111_contig_1048_796 | vegan > omnivore | 1.50701 | 0.03622 |
| A111_contig_1048_797 | vegan > omnivore | 1.29015 | 0.02876 |