Cluster: A111.bin_5_CGC2
🧬 Cluster Details
- Gene Count: 16
- CAZyme Count: 5
- Substrate:
- Genome ID: A111.bin_5
- CGC Family ID: CGCFAM_01493
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | A111_contig_1206 | A111_contig_1206_110 | 128541 | 129962 | + | CE20 |
| CAZyme | A111_contig_1206 | A111_contig_1206_111 | 130118 | 132652 | - | GH9 |
| pfam | A111_contig_1206 | A111_contig_1206_112 | 132992 | 134245 | + | GlcNAc_2-epim |
| NULL(UNKNOWN) | A111_contig_1206 | A111_contig_1206_113 | 134242 | 136143 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | A111_contig_1206 | A111_contig_1206_114 | 136184 | 137914 | + | GH9 |
| TF | A111_contig_1206 | A111_contig_1206_115 | 137920 | 141831 | - | HTH_AraC | HTH_AraC |
| CAZyme | A111_contig_1206 | A111_contig_1206_116 | 142088 | 144463 | + | GH31_3 |
| TC | A111_contig_1206 | A111_contig_1206_117 | 144675 | 147848 | + | 1.B.14.6.1 |
| pfam | A111_contig_1206 | A111_contig_1206_118 | 147867 | 149552 | + | SusD_RagB | SusD-like_3 |
| pfam | A111_contig_1206 | A111_contig_1206_119 | 149767 | 150999 | + | GlcNAc_2-epim |
| CAZyme | A111_contig_1206 | A111_contig_1206_120 | 151005 | 153533 | + | GH9 |
| NULL(UNKNOWN) | A111_contig_1206 | A111_contig_1206_121 | 153523 | 155412 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | A111_contig_1206 | A111_contig_1206_122 | 155495 | 156304 | - | 3.A.1.15.15 |
| pfam | A111_contig_1206 | A111_contig_1206_123 | 156339 | 157241 | - | ZnuA |
| pfam | A111_contig_1206 | A111_contig_1206_124 | 157319 | 157999 | - | Methyltransf_30 |
| TC | A111_contig_1206 | A111_contig_1206_125 | 158162 | 158641 | - | 9.B.27.3.1 |
Gene ID: A111_contig_1206_110
Type: CAZyme
Location: 128541 - 129962 (+)
Type: CAZyme
Location: 128541 - 129962 (+)
Gene ID: A111_contig_1206_111
Type: CAZyme
Location: 130118 - 132652 (-)
Type: CAZyme
Location: 130118 - 132652 (-)
Gene ID: A111_contig_1206_112
Type: pfam
Location: 132992 - 134245 (+)
Type: pfam
Location: 132992 - 134245 (+)
Gene ID: A111_contig_1206_113
Type:
Location: 134242 - 136143 (+)
Type:
Location: 134242 - 136143 (+)
Gene ID: A111_contig_1206_114
Type: CAZyme
Location: 136184 - 137914 (+)
Type: CAZyme
Location: 136184 - 137914 (+)
Gene ID: A111_contig_1206_115
Type: TF
Location: 137920 - 141831 (-)
Type: TF
Location: 137920 - 141831 (-)
Gene ID: A111_contig_1206_116
Type: CAZyme
Location: 142088 - 144463 (+)
Type: CAZyme
Location: 142088 - 144463 (+)
Gene ID: A111_contig_1206_117
Type: TC
Location: 144675 - 147848 (+)
Type: TC
Location: 144675 - 147848 (+)
Gene ID: A111_contig_1206_118
Type: pfam
Location: 147867 - 149552 (+)
Type: pfam
Location: 147867 - 149552 (+)
Gene ID: A111_contig_1206_119
Type: pfam
Location: 149767 - 150999 (+)
Type: pfam
Location: 149767 - 150999 (+)
Gene ID: A111_contig_1206_120
Type: CAZyme
Location: 151005 - 153533 (+)
Type: CAZyme
Location: 151005 - 153533 (+)
Gene ID: A111_contig_1206_121
Type:
Location: 153523 - 155412 (+)
Type:
Location: 153523 - 155412 (+)
Gene ID: A111_contig_1206_122
Type: TC
Location: 155495 - 156304 (-)
Type: TC
Location: 155495 - 156304 (-)
Gene ID: A111_contig_1206_123
Type: pfam
Location: 156339 - 157241 (-)
Type: pfam
Location: 156339 - 157241 (-)
Gene ID: A111_contig_1206_124
Type: pfam
Location: 157319 - 157999 (-)
Type: pfam
Location: 157319 - 157999 (-)
Gene ID: A111_contig_1206_125
Type: TC
Location: 158162 - 158641 (-)
Type: TC
Location: 158162 - 158641 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Bacteroides
Species
Bacteroides uniformis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| A111_contig_1206_115 | vegetarian > vegan | 1.05745 | 0.03451 |
| A111_contig_1206_118 | vegetarian > vegan | 1.12364 | 0.03430 |