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Cluster: A111.bin_5_CGC18

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme A111_contig_1048 A111_contig_1048_188 274228 275226 + GT2
CAZyme A111_contig_1048 A111_contig_1048_189 275239 276219 + GT2
CAZyme A111_contig_1048 A111_contig_1048_190 276293 277444 + GT4
CAZyme A111_contig_1048 A111_contig_1048_191 277465 278445 + GT2
CAZyme A111_contig_1048 A111_contig_1048_192 278447 279358 + GT11
CAZyme A111_contig_1048 A111_contig_1048_193 279436 280314 + GT2
pfam A111_contig_1048 A111_contig_1048_194 280319 281182 + DUF6492
TC A111_contig_1048 A111_contig_1048_195 281302 283140 + 3.A.1.135.5
Gene ID: A111_contig_1048_188
Type: CAZyme
Location: 274228 - 275226 (+)
Gene ID: A111_contig_1048_189
Type: CAZyme
Location: 275239 - 276219 (+)
Gene ID: A111_contig_1048_190
Type: CAZyme
Location: 276293 - 277444 (+)
Gene ID: A111_contig_1048_191
Type: CAZyme
Location: 277465 - 278445 (+)
Gene ID: A111_contig_1048_192
Type: CAZyme
Location: 278447 - 279358 (+)
Gene ID: A111_contig_1048_193
Type: CAZyme
Location: 279436 - 280314 (+)
Gene ID: A111_contig_1048_194
Type: pfam
Location: 280319 - 281182 (+)
Gene ID: A111_contig_1048_195
Type: TC
Location: 281302 - 283140 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
A111_contig_1048_195 vegan > omnivore 1.02443 0.02876

🧭 Explore Read Mapping of CGC

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