Cluster: A111.bin_5_CGC13
🧬 Cluster Details
- Gene Count: 15
- CAZyme Count: 11
- Substrate:
- Genome ID: A111.bin_5
- CGC Family ID: CGCFAM_01503
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | A111_contig_1048 | A111_contig_1048_28 | 38123 | 42370 | - | CBM32 | CBM32 | GH2 |
| TF | A111_contig_1048 | A111_contig_1048_29 | 42393 | 46460 | - | HTH_AraC |
| CAZyme | A111_contig_1048 | A111_contig_1048_30 | 46621 | 48570 | - | GH97 |
| CAZyme | A111_contig_1048 | A111_contig_1048_31 | 48902 | 52531 | + | GH38 |
| CAZyme | A111_contig_1048 | A111_contig_1048_32 | 52679 | 54745 | + | GH127 |
| CAZyme | A111_contig_1048 | A111_contig_1048_33 | 54968 | 56197 | + | GH76 |
| CAZyme | A111_contig_1048 | A111_contig_1048_34 | 56217 | 57680 | + | GH125 |
| TC | A111_contig_1048 | A111_contig_1048_35 | 57823 | 60999 | + | 1.B.14.6.1 |
| pfam | A111_contig_1048 | A111_contig_1048_36 | 61015 | 62625 | + | SusD_RagB | SusD-like_3 |
| pfam | A111_contig_1048 | A111_contig_1048_37 | 62659 | 63807 | + | SusE |
| CAZyme | A111_contig_1048 | A111_contig_1048_38 | 63822 | 64955 | + | GH76 |
| CAZyme | A111_contig_1048 | A111_contig_1048_39 | 65098 | 67248 | + | GH92 |
| CAZyme | A111_contig_1048 | A111_contig_1048_40 | 67264 | 69891 | + | CBM67 | GH78 |
| CAZyme | A111_contig_1048 | A111_contig_1048_41 | 70005 | 72182 | - | GH3 |
| CAZyme | A111_contig_1048 | A111_contig_1048_42 | 72217 | 74553 | - | GH31_3 |
Gene ID: A111_contig_1048_28
Type: CAZyme
Location: 38123 - 42370 (-)
Type: CAZyme
Location: 38123 - 42370 (-)
Gene ID: A111_contig_1048_29
Type: TF
Location: 42393 - 46460 (-)
Type: TF
Location: 42393 - 46460 (-)
Gene ID: A111_contig_1048_30
Type: CAZyme
Location: 46621 - 48570 (-)
Type: CAZyme
Location: 46621 - 48570 (-)
Gene ID: A111_contig_1048_31
Type: CAZyme
Location: 48902 - 52531 (+)
Type: CAZyme
Location: 48902 - 52531 (+)
Gene ID: A111_contig_1048_32
Type: CAZyme
Location: 52679 - 54745 (+)
Type: CAZyme
Location: 52679 - 54745 (+)
Gene ID: A111_contig_1048_33
Type: CAZyme
Location: 54968 - 56197 (+)
Type: CAZyme
Location: 54968 - 56197 (+)
Gene ID: A111_contig_1048_34
Type: CAZyme
Location: 56217 - 57680 (+)
Type: CAZyme
Location: 56217 - 57680 (+)
Gene ID: A111_contig_1048_35
Type: TC
Location: 57823 - 60999 (+)
Type: TC
Location: 57823 - 60999 (+)
Gene ID: A111_contig_1048_36
Type: pfam
Location: 61015 - 62625 (+)
Type: pfam
Location: 61015 - 62625 (+)
Gene ID: A111_contig_1048_37
Type: pfam
Location: 62659 - 63807 (+)
Type: pfam
Location: 62659 - 63807 (+)
Gene ID: A111_contig_1048_38
Type: CAZyme
Location: 63822 - 64955 (+)
Type: CAZyme
Location: 63822 - 64955 (+)
Gene ID: A111_contig_1048_39
Type: CAZyme
Location: 65098 - 67248 (+)
Type: CAZyme
Location: 65098 - 67248 (+)
Gene ID: A111_contig_1048_40
Type: CAZyme
Location: 67264 - 69891 (+)
Type: CAZyme
Location: 67264 - 69891 (+)
Gene ID: A111_contig_1048_41
Type: CAZyme
Location: 70005 - 72182 (-)
Type: CAZyme
Location: 70005 - 72182 (-)
Gene ID: A111_contig_1048_42
Type: CAZyme
Location: 72217 - 74553 (-)
Type: CAZyme
Location: 72217 - 74553 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Bacteroides
Species
Bacteroides uniformis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.