Cluster: A111.bin_3_CGC19
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 2
- Substrate:
- Genome ID: A111.bin_3
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | A111_contig_35 | A111_contig_35_1759 | 1971695 | 1976662 | + | CBM32 | GH89 |
| pfam | A111_contig_35 | A111_contig_35_1760 | 1976810 | 1977352 | + | ECF-ribofla_trS | ECF_trnsprt |
| CAZyme | A111_contig_35 | A111_contig_35_1761 | 1977462 | 1979516 | - | CBM34 | GH13_39 |
| TC | A111_contig_35 | A111_contig_35_1762 | 1979667 | 1981424 | - | 3.A.16.1.2 |
Gene ID: A111_contig_35_1759
Type: CAZyme
Location: 1971695 - 1976662 (+)
Type: CAZyme
Location: 1971695 - 1976662 (+)
Gene ID: A111_contig_35_1760
Type: pfam
Location: 1976810 - 1977352 (+)
Type: pfam
Location: 1976810 - 1977352 (+)
Gene ID: A111_contig_35_1761
Type: CAZyme
Location: 1977462 - 1979516 (-)
Type: CAZyme
Location: 1977462 - 1979516 (-)
Gene ID: A111_contig_35_1762
Type: TC
Location: 1979667 - 1981424 (-)
Type: TC
Location: 1979667 - 1981424 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Mediterraneibacter
Species
Mediterraneibacter lactaris
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.