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Cluster: A111.bin_3_CGC15

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC A111_contig_35 A111_contig_35_1226 1360255 1361586 + 1.A.26.1.3
pfam A111_contig_35 A111_contig_35_1227 1361990 1364140 - S1 | T2SSK | Tex_N | HHH_3 | HHH_7 | Tex_YqgF | HHH_9 | Tex_central_region | S1_RRP5
pfam A111_contig_35 A111_contig_35_1228 1364402 1365289 + PseudoU_synth_2
CAZyme A111_contig_35 A111_contig_35_1229 1366016 1367140 - CE9
STP A111_contig_35 A111_contig_35_1230 1367224 1367757 - ACT
pfam A111_contig_35 A111_contig_35_1231 1367759 1369477 - TPP_enzyme_M | TPP_enzyme_C | TPP_enzyme_N
TC A111_contig_35 A111_contig_35_1232 1369685 1370509 - 3.A.1.15.3
TC A111_contig_35 A111_contig_35_1233 1370506 1371213 - 3.A.1.15.4
Gene ID: A111_contig_35_1226
Type: TC
Location: 1360255 - 1361586 (+)
Gene ID: A111_contig_35_1227
Type: pfam
Location: 1361990 - 1364140 (-)
Gene ID: A111_contig_35_1228
Type: pfam
Location: 1364402 - 1365289 (+)
Gene ID: A111_contig_35_1229
Type: CAZyme
Location: 1366016 - 1367140 (-)
Gene ID: A111_contig_35_1230
Type: STP
Location: 1367224 - 1367757 (-)
Gene ID: A111_contig_35_1231
Type: pfam
Location: 1367759 - 1369477 (-)
Gene ID: A111_contig_35_1232
Type: TC
Location: 1369685 - 1370509 (-)
Gene ID: A111_contig_35_1233
Type: TC
Location: 1370506 - 1371213 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
A111_contig_35_1232 vegan > omnivore 1.51744 0.04014
A111_contig_35_1232 vegetarian > omnivore 1.89448 0.01743

🧭 Explore Read Mapping of CGC

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