Cluster: A111.bin_3_CGC13
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: A111.bin_3
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | A111_contig_35 | A111_contig_35_1166 | 1286355 | 1288313 | - | 3.A.1.135.5 |
| TC | A111_contig_35 | A111_contig_35_1167 | 1288261 | 1290009 | - | 3.A.1.135.5 |
| TF | A111_contig_35 | A111_contig_35_1168 | 1290003 | 1290488 | - | MarR |
| pfam | A111_contig_35 | A111_contig_35_1169 | 1290750 | 1291694 | - | Mem_trans |
| TC | A111_contig_35 | A111_contig_35_1170 | 1291699 | 1295286 | - | 3.A.1.122.2 |
| CAZyme | A111_contig_35 | A111_contig_35_1171 | 1295416 | 1297161 | - | GH123 |
Gene ID: A111_contig_35_1166
Type: TC
Location: 1286355 - 1288313 (-)
Type: TC
Location: 1286355 - 1288313 (-)
Gene ID: A111_contig_35_1167
Type: TC
Location: 1288261 - 1290009 (-)
Type: TC
Location: 1288261 - 1290009 (-)
Gene ID: A111_contig_35_1168
Type: TF
Location: 1290003 - 1290488 (-)
Type: TF
Location: 1290003 - 1290488 (-)
Gene ID: A111_contig_35_1169
Type: pfam
Location: 1290750 - 1291694 (-)
Type: pfam
Location: 1290750 - 1291694 (-)
Gene ID: A111_contig_35_1170
Type: TC
Location: 1291699 - 1295286 (-)
Type: TC
Location: 1291699 - 1295286 (-)
Gene ID: A111_contig_35_1171
Type: CAZyme
Location: 1295416 - 1297161 (-)
Type: CAZyme
Location: 1295416 - 1297161 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Mediterraneibacter
Species
Mediterraneibacter lactaris
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.