Cluster: A111.bin_36_CGC8
🧬 Cluster Details
- Gene Count: 13
- CAZyme Count: 3
- Substrate:
- Genome ID: A111.bin_36
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | A111_contig_2692 | A111_contig_2692_281 | 310702 | 311889 | - | CE9 |
| pfam | A111_contig_2692 | A111_contig_2692_282 | 311880 | 312698 | - | YdjC |
| NULL(UNKNOWN) | A111_contig_2692 | A111_contig_2692_283 | 312695 | 313591 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | A111_contig_2692 | A111_contig_2692_284 | 313660 | 314478 | - | 4.A.6.1.19 |
| TC | A111_contig_2692 | A111_contig_2692_285 | 314478 | 315269 | - | 4.A.6.1.19 |
| TC | A111_contig_2692 | A111_contig_2692_286 | 315314 | 315808 | - | 4.A.6.1.1 |
| TC | A111_contig_2692 | A111_contig_2692_287 | 315828 | 316235 | - | 4.A.6.1.19 |
| TF | A111_contig_2692 | A111_contig_2692_288 | 316350 | 318347 | - | HTH_11 | Mga |
| pfam | A111_contig_2692 | A111_contig_2692_289 | 319022 | 319855 | - | PRD | PRD | CAT_RBD |
| CAZyme | A111_contig_2692 | A111_contig_2692_290 | 319868 | 321250 | - | GH1 |
| TC | A111_contig_2692 | A111_contig_2692_291 | 321253 | 323109 | - | 4.A.1.2.11 |
| NULL(UNKNOWN) | A111_contig_2692 | A111_contig_2692_292 | 324338 | 325954 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | A111_contig_2692 | A111_contig_2692_293 | 326131 | 328212 | + | GH13 |
Gene ID: A111_contig_2692_281
Type: CAZyme
Location: 310702 - 311889 (-)
Type: CAZyme
Location: 310702 - 311889 (-)
Gene ID: A111_contig_2692_282
Type: pfam
Location: 311880 - 312698 (-)
Type: pfam
Location: 311880 - 312698 (-)
Gene ID: A111_contig_2692_283
Type:
Location: 312695 - 313591 (-)
Type:
Location: 312695 - 313591 (-)
Gene ID: A111_contig_2692_284
Type: TC
Location: 313660 - 314478 (-)
Type: TC
Location: 313660 - 314478 (-)
Gene ID: A111_contig_2692_285
Type: TC
Location: 314478 - 315269 (-)
Type: TC
Location: 314478 - 315269 (-)
Gene ID: A111_contig_2692_286
Type: TC
Location: 315314 - 315808 (-)
Type: TC
Location: 315314 - 315808 (-)
Gene ID: A111_contig_2692_287
Type: TC
Location: 315828 - 316235 (-)
Type: TC
Location: 315828 - 316235 (-)
Gene ID: A111_contig_2692_288
Type: TF
Location: 316350 - 318347 (-)
Type: TF
Location: 316350 - 318347 (-)
Gene ID: A111_contig_2692_289
Type: pfam
Location: 319022 - 319855 (-)
Type: pfam
Location: 319022 - 319855 (-)
Gene ID: A111_contig_2692_290
Type: CAZyme
Location: 319868 - 321250 (-)
Type: CAZyme
Location: 319868 - 321250 (-)
Gene ID: A111_contig_2692_291
Type: TC
Location: 321253 - 323109 (-)
Type: TC
Location: 321253 - 323109 (-)
Gene ID: A111_contig_2692_292
Type:
Location: 324338 - 325954 (-)
Type:
Location: 324338 - 325954 (-)
Gene ID: A111_contig_2692_293
Type: CAZyme
Location: 326131 - 328212 (+)
Type: CAZyme
Location: 326131 - 328212 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_I
Class
Bacilli_A
Order
Erysipelotrichales
Family
Erysipelotrichaceae
Genus
Holdemania
Species
Holdemania massiliensis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.