Cluster: A111.bin_36_CGC6
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: A111.bin_36
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | A111_contig_2692 | A111_contig_2692_161 | 180783 | 182435 | + | GH13_31 |
| TF | A111_contig_2692 | A111_contig_2692_162 | 182531 | 183418 | - | HTH_6 |
| pfam | A111_contig_2692 | A111_contig_2692_163 | 183709 | 184947 | - | Mannitol_dh | Mannitol_dh_C |
| TC | A111_contig_2692 | A111_contig_2692_164 | 184964 | 185809 | - | 4.A.6.1.19 |
| TC | A111_contig_2692 | A111_contig_2692_165 | 185806 | 186603 | - | 4.A.6.1.22 |
| TC | A111_contig_2692 | A111_contig_2692_166 | 186619 | 187098 | - | 4.A.6.1.3 |
Gene ID: A111_contig_2692_161
Type: CAZyme
Location: 180783 - 182435 (+)
Type: CAZyme
Location: 180783 - 182435 (+)
Gene ID: A111_contig_2692_162
Type: TF
Location: 182531 - 183418 (-)
Type: TF
Location: 182531 - 183418 (-)
Gene ID: A111_contig_2692_163
Type: pfam
Location: 183709 - 184947 (-)
Type: pfam
Location: 183709 - 184947 (-)
Gene ID: A111_contig_2692_164
Type: TC
Location: 184964 - 185809 (-)
Type: TC
Location: 184964 - 185809 (-)
Gene ID: A111_contig_2692_165
Type: TC
Location: 185806 - 186603 (-)
Type: TC
Location: 185806 - 186603 (-)
Gene ID: A111_contig_2692_166
Type: TC
Location: 186619 - 187098 (-)
Type: TC
Location: 186619 - 187098 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_I
Class
Bacilli_A
Order
Erysipelotrichales
Family
Erysipelotrichaceae
Genus
Holdemania
Species
Holdemania massiliensis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.