Cluster: A111.bin_36_CGC34
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: A111.bin_36
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | A111_contig_2690 | A111_contig_2690_24 | 26755 | 27333 | - | 2.A.51.1.5 |
| TF | A111_contig_2690 | A111_contig_2690_25 | 27440 | 28390 | + | HTH_1 |
| CAZyme | A111_contig_2690 | A111_contig_2690_26 | 28613 | 29854 | - | GH29 |
| TC | A111_contig_2690 | A111_contig_2690_27 | 29924 | 30709 | - | 2.A.102.4.4 |
| pfam | A111_contig_2690 | A111_contig_2690_28 | 31151 | 32281 | - | TelA |
| TC | A111_contig_2690 | A111_contig_2690_29 | 32537 | 34660 | - | 3.A.24.3.1 |
Gene ID: A111_contig_2690_24
Type: TC
Location: 26755 - 27333 (-)
Type: TC
Location: 26755 - 27333 (-)
Gene ID: A111_contig_2690_25
Type: TF
Location: 27440 - 28390 (+)
Type: TF
Location: 27440 - 28390 (+)
Gene ID: A111_contig_2690_26
Type: CAZyme
Location: 28613 - 29854 (-)
Type: CAZyme
Location: 28613 - 29854 (-)
Gene ID: A111_contig_2690_27
Type: TC
Location: 29924 - 30709 (-)
Type: TC
Location: 29924 - 30709 (-)
Gene ID: A111_contig_2690_28
Type: pfam
Location: 31151 - 32281 (-)
Type: pfam
Location: 31151 - 32281 (-)
Gene ID: A111_contig_2690_29
Type: TC
Location: 32537 - 34660 (-)
Type: TC
Location: 32537 - 34660 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_I
Class
Bacilli_A
Order
Erysipelotrichales
Family
Erysipelotrichaceae
Genus
Holdemania
Species
Holdemania massiliensis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.