Cluster: A111.bin_36_CGC25
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 3
- Substrate:
- Genome ID: A111.bin_36
- CGC Family ID: CGCFAM_06534
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | A111_contig_2691 | A111_contig_2691_42 | 47381 | 48793 | + | GH43_9 |
| CAZyme | A111_contig_2691 | A111_contig_2691_43 | 48790 | 50490 | + | GH13_31 |
| TF | A111_contig_2691 | A111_contig_2691_44 | 50492 | 51067 | + | 0037176 |
| TC | A111_contig_2691 | A111_contig_2691_45 | 51217 | 52314 | + | 3.A.1.1.26 |
| CAZyme | A111_contig_2691 | A111_contig_2691_46 | 52327 | 53634 | + | GH13 |
Gene ID: A111_contig_2691_42
Type: CAZyme
Location: 47381 - 48793 (+)
Type: CAZyme
Location: 47381 - 48793 (+)
Gene ID: A111_contig_2691_43
Type: CAZyme
Location: 48790 - 50490 (+)
Type: CAZyme
Location: 48790 - 50490 (+)
Gene ID: A111_contig_2691_44
Type: TF
Location: 50492 - 51067 (+)
Type: TF
Location: 50492 - 51067 (+)
Gene ID: A111_contig_2691_45
Type: TC
Location: 51217 - 52314 (+)
Type: TC
Location: 51217 - 52314 (+)
Gene ID: A111_contig_2691_46
Type: CAZyme
Location: 52327 - 53634 (+)
Type: CAZyme
Location: 52327 - 53634 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_I
Class
Bacilli_A
Order
Erysipelotrichales
Family
Erysipelotrichaceae
Genus
Holdemania
Species
Holdemania massiliensis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.