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Cluster: A111.bin_36_CGC20

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme A111_contig_2239 A111_contig_2239_30 25821 27227 - CE4
pfam A111_contig_2239 A111_contig_2239_31 27562 28239 - CutC
TF A111_contig_2239 A111_contig_2239_32 28525 28998 + MarR
TC A111_contig_2239 A111_contig_2239_33 29002 30762 + 3.A.1.106.15
TC A111_contig_2239 A111_contig_2239_34 30749 32401 + 3.A.1.135.9
pfam A111_contig_2239 A111_contig_2239_35 32458 33807 - AAA_14 | DUF4143
NULL(UNKNOWN) A111_contig_2239 A111_contig_2239_36 34108 34449 - NULL(UNKNOWN)
[View Structural Homologs]
TC A111_contig_2239 A111_contig_2239_37 34616 35392 - 3.A.1.14.8
TC A111_contig_2239 A111_contig_2239_38 35385 36380 - 3.A.1.14.16
Gene ID: A111_contig_2239_30
Type: CAZyme
Location: 25821 - 27227 (-)
Gene ID: A111_contig_2239_31
Type: pfam
Location: 27562 - 28239 (-)
Gene ID: A111_contig_2239_32
Type: TF
Location: 28525 - 28998 (+)
Gene ID: A111_contig_2239_33
Type: TC
Location: 29002 - 30762 (+)
Gene ID: A111_contig_2239_34
Type: TC
Location: 30749 - 32401 (+)
Gene ID: A111_contig_2239_35
Type: pfam
Location: 32458 - 33807 (-)
Gene ID: A111_contig_2239_36
Type:
Location: 34108 - 34449 (-)
Gene ID: A111_contig_2239_37
Type: TC
Location: 34616 - 35392 (-)
Gene ID: A111_contig_2239_38
Type: TC
Location: 35385 - 36380 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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