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Cluster: A111.bin_36_CGC2

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC A111_contig_2963 A111_contig_2963_43 45043 46428 - 2.A.22.5.3
TF A111_contig_2963 A111_contig_2963_44 46703 47143 + LytTR
pfam A111_contig_2963 A111_contig_2963_45 47153 47629 + DUF3021
CAZyme A111_contig_2963 A111_contig_2963_46 47673 48875 - CE9
CAZyme A111_contig_2963 A111_contig_2963_47 48891 50111 - CE9
TC A111_contig_2963 A111_contig_2963_48 50353 51165 - 4.A.6.1.19
TC A111_contig_2963 A111_contig_2963_49 51158 51955 - 4.A.6.1.9
TC A111_contig_2963 A111_contig_2963_50 51968 52468 - 4.A.6.1.19
TC A111_contig_2963 A111_contig_2963_51 52534 52947 - 4.A.6.1.19
Gene ID: A111_contig_2963_43
Type: TC
Location: 45043 - 46428 (-)
Gene ID: A111_contig_2963_44
Type: TF
Location: 46703 - 47143 (+)
Gene ID: A111_contig_2963_45
Type: pfam
Location: 47153 - 47629 (+)
Gene ID: A111_contig_2963_46
Type: CAZyme
Location: 47673 - 48875 (-)
Gene ID: A111_contig_2963_47
Type: CAZyme
Location: 48891 - 50111 (-)
Gene ID: A111_contig_2963_48
Type: TC
Location: 50353 - 51165 (-)
Gene ID: A111_contig_2963_49
Type: TC
Location: 51158 - 51955 (-)
Gene ID: A111_contig_2963_50
Type: TC
Location: 51968 - 52468 (-)
Gene ID: A111_contig_2963_51
Type: TC
Location: 52534 - 52947 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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