Cluster: A111.bin_36_CGC11
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 2
- Substrate:
- Genome ID: A111.bin_36
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | A111_contig_2692 | A111_contig_2692_393 | 438262 | 439644 | - | GH4 |
| pfam | A111_contig_2692 | A111_contig_2692_394 | 439660 | 440712 | - | Amidohydro_2 |
| CAZyme | A111_contig_2692 | A111_contig_2692_395 | 440715 | 441425 | - | CE14 |
| NULL(UNKNOWN) | A111_contig_2692 | A111_contig_2692_396 | 441413 | 441880 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | A111_contig_2692 | A111_contig_2692_397 | 441880 | 442701 | - | 3.A.1.1.34 |
| TC | A111_contig_2692 | A111_contig_2692_398 | 442712 | 443617 | - | 3.A.1.1.11 |
Gene ID: A111_contig_2692_393
Type: CAZyme
Location: 438262 - 439644 (-)
Type: CAZyme
Location: 438262 - 439644 (-)
Gene ID: A111_contig_2692_394
Type: pfam
Location: 439660 - 440712 (-)
Type: pfam
Location: 439660 - 440712 (-)
Gene ID: A111_contig_2692_395
Type: CAZyme
Location: 440715 - 441425 (-)
Type: CAZyme
Location: 440715 - 441425 (-)
Gene ID: A111_contig_2692_396
Type:
Location: 441413 - 441880 (-)
Type:
Location: 441413 - 441880 (-)
Gene ID: A111_contig_2692_397
Type: TC
Location: 441880 - 442701 (-)
Type: TC
Location: 441880 - 442701 (-)
Gene ID: A111_contig_2692_398
Type: TC
Location: 442712 - 443617 (-)
Type: TC
Location: 442712 - 443617 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_I
Class
Bacilli_A
Order
Erysipelotrichales
Family
Erysipelotrichaceae
Genus
Holdemania
Species
Holdemania massiliensis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.