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Cluster: A103.bin_3_CGC8

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC A103_contig_1100 A103_contig_1100_369 444160 445821 - 4.C.1.1.7
pfam A103_contig_1100 A103_contig_1100_370 446045 447361 + UPF0004 | Radical_SAM
pfam A103_contig_1100 A103_contig_1100_371 447371 448282 + Lip_A_acyltrans
CAZyme A103_contig_1100 A103_contig_1100_372 448284 449279 + GT2
pfam A103_contig_1100 A103_contig_1100_373 449289 450506 - Aminotran_5
pfam A103_contig_1100 A103_contig_1100_374 450531 451880 - SUFBD_core | SufBD_N
TC A103_contig_1100 A103_contig_1100_375 451887 452642 - 3.A.1.27.4
Gene ID: A103_contig_1100_369
Type: TC
Location: 444160 - 445821 (-)
Gene ID: A103_contig_1100_370
Type: pfam
Location: 446045 - 447361 (+)
Gene ID: A103_contig_1100_371
Type: pfam
Location: 447371 - 448282 (+)
Gene ID: A103_contig_1100_372
Type: CAZyme
Location: 448284 - 449279 (+)
Gene ID: A103_contig_1100_373
Type: pfam
Location: 449289 - 450506 (-)
Gene ID: A103_contig_1100_374
Type: pfam
Location: 450531 - 451880 (-)
Gene ID: A103_contig_1100_375
Type: TC
Location: 451887 - 452642 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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