Cluster: A103.bin_3_CGC6
🧬 Cluster Details
- Gene Count: 12
- CAZyme Count: 4
- Substrate:
- Genome ID: A103.bin_3
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | A103_contig_1100 | A103_contig_1100_328 | 371074 | 373224 | - | 3.A.3.5.30 |
| pfam | A103_contig_1100 | A103_contig_1100_329 | 373297 | 373662 | - | Bactofilin |
| sulfatase | A103_contig_1100 | A103_contig_1100_330 | 373837 | 374850 | - | S1_4 |
| CAZyme | A103_contig_1100 | A103_contig_1100_331 | 374861 | 376849 | - | GH36 |
| sulfatase | A103_contig_1100 | A103_contig_1100_332 | 376868 | 378304 | - | S1_20 |
| CAZyme | A103_contig_1100 | A103_contig_1100_333 | 378327 | 380756 | - | GH2 |
| CAZyme | A103_contig_1100 | A103_contig_1100_334 | 380795 | 383152 | - | GH36 |
| pfam | A103_contig_1100 | A103_contig_1100_335 | 383255 | 385138 | - | FG-GAP_3 | FG-GAP_3 | FG-GAP_3 | FG-GAP_3 | FG-GAP_3 |
| pfam | A103_contig_1100 | A103_contig_1100_336 | 385232 | 386791 | - | SusD_RagB | SusD-like_3 |
| TC | A103_contig_1100 | A103_contig_1100_337 | 386811 | 389870 | - | 1.B.14.6.1 |
| CAZyme | A103_contig_1100 | A103_contig_1100_338 | 389912 | 392089 | - | GH36 |
| TC | A103_contig_1100 | A103_contig_1100_339 | 392110 | 393504 | - | 2.A.1.1.3 |
Gene ID: A103_contig_1100_328
Type: TC
Location: 371074 - 373224 (-)
Type: TC
Location: 371074 - 373224 (-)
Gene ID: A103_contig_1100_329
Type: pfam
Location: 373297 - 373662 (-)
Type: pfam
Location: 373297 - 373662 (-)
Gene ID: A103_contig_1100_330
Type: sulfatase
Location: 373837 - 374850 (-)
Type: sulfatase
Location: 373837 - 374850 (-)
Gene ID: A103_contig_1100_331
Type: CAZyme
Location: 374861 - 376849 (-)
Type: CAZyme
Location: 374861 - 376849 (-)
Gene ID: A103_contig_1100_332
Type: sulfatase
Location: 376868 - 378304 (-)
Type: sulfatase
Location: 376868 - 378304 (-)
Gene ID: A103_contig_1100_333
Type: CAZyme
Location: 378327 - 380756 (-)
Type: CAZyme
Location: 378327 - 380756 (-)
Gene ID: A103_contig_1100_334
Type: CAZyme
Location: 380795 - 383152 (-)
Type: CAZyme
Location: 380795 - 383152 (-)
Gene ID: A103_contig_1100_335
Type: pfam
Location: 383255 - 385138 (-)
Type: pfam
Location: 383255 - 385138 (-)
Gene ID: A103_contig_1100_336
Type: pfam
Location: 385232 - 386791 (-)
Type: pfam
Location: 385232 - 386791 (-)
Gene ID: A103_contig_1100_337
Type: TC
Location: 386811 - 389870 (-)
Type: TC
Location: 386811 - 389870 (-)
Gene ID: A103_contig_1100_338
Type: CAZyme
Location: 389912 - 392089 (-)
Type: CAZyme
Location: 389912 - 392089 (-)
Gene ID: A103_contig_1100_339
Type: TC
Location: 392110 - 393504 (-)
Type: TC
Location: 392110 - 393504 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Barnesiellaceae
Genus
Barnesiella
Species
Barnesiella intestinihominis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| A103_contig_1100_330 | vegetarian > vegan | 1.52023 | 0.01077 |
| A103_contig_1100_331 | vegetarian > vegan | 1.29184 | 0.01077 |
| A103_contig_1100_332 | vegetarian > vegan | 1.34974 | 0.01077 |
| A103_contig_1100_333 | vegetarian > vegan | 1.15929 | 0.01077 |
| A103_contig_1100_335 | vegetarian > vegan | 1.27051 | 0.01077 |
| A103_contig_1100_337 | vegetarian > vegan | 1.20557 | 0.01077 |
| A103_contig_1100_338 | vegetarian > vegan | 1.16968 | 0.01077 |
| A103_contig_1100_339 | vegetarian > vegan | 1.49392 | 0.01077 |