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Cluster: A103.bin_3_CGC39

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme A103_contig_1100 A103_contig_1100_1736 2179957 2181822 - GH29
TF A103_contig_1100 A103_contig_1100_1737 2182010 2182726 - LytTR
pfam A103_contig_1100 A103_contig_1100_1738 2182723 2183730 - His_kinase
TC A103_contig_1100 A103_contig_1100_1739 2183974 2185074 + 8.A.1.6.3
TC A103_contig_1100 A103_contig_1100_1740 2185084 2188227 + 2.A.6.2.22
TC A103_contig_1100 A103_contig_1100_1741 2188245 2189606 + 2.A.6.2.23
sulfatase A103_contig_1100 A103_contig_1100_1742 2189968 2191554 + S1_11
CAZyme A103_contig_1100 A103_contig_1100_1743 2191605 2194013 + GH95
Gene ID: A103_contig_1100_1736
Type: CAZyme
Location: 2179957 - 2181822 (-)
Gene ID: A103_contig_1100_1737
Type: TF
Location: 2182010 - 2182726 (-)
Gene ID: A103_contig_1100_1738
Type: pfam
Location: 2182723 - 2183730 (-)
Gene ID: A103_contig_1100_1739
Type: TC
Location: 2183974 - 2185074 (+)
Gene ID: A103_contig_1100_1740
Type: TC
Location: 2185084 - 2188227 (+)
Gene ID: A103_contig_1100_1741
Type: TC
Location: 2188245 - 2189606 (+)
Gene ID: A103_contig_1100_1742
Type: sulfatase
Location: 2189968 - 2191554 (+)
Gene ID: A103_contig_1100_1743
Type: CAZyme
Location: 2191605 - 2194013 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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