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Cluster: A103.bin_3_CGC34

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme A103_contig_1100 A103_contig_1100_1465 1872907 1874625 + GH13_38
STP A103_contig_1100 A103_contig_1100_1466 1874704 1875642 + Pribosyltran
NULL(UNKNOWN) A103_contig_1100 A103_contig_1100_1467 1875921 1876061 + NULL(UNKNOWN)
[View Structural Homologs]
TC A103_contig_1100 A103_contig_1100_1468 1876002 1877912 - 1.A.33.1.2
STP A103_contig_1100 A103_contig_1100_1469 1878259 1878672 + Glyoxalase
TC A103_contig_1100 A103_contig_1100_1470 1878677 1880230 + 3.B.1.1.2
pfam A103_contig_1100 A103_contig_1100_1471 1880252 1881166 + LTD | OAD_gamma
pfam A103_contig_1100 A103_contig_1100_1472 1881192 1881623 + Biotin_lipoyl
TC A103_contig_1100 A103_contig_1100_1473 1881628 1882785 + 3.B.1.1.2
Gene ID: A103_contig_1100_1465
Type: CAZyme
Location: 1872907 - 1874625 (+)
Gene ID: A103_contig_1100_1466
Type: STP
Location: 1874704 - 1875642 (+)
Gene ID: A103_contig_1100_1467
Type:
Location: 1875921 - 1876061 (+)
Gene ID: A103_contig_1100_1468
Type: TC
Location: 1876002 - 1877912 (-)
Gene ID: A103_contig_1100_1469
Type: STP
Location: 1878259 - 1878672 (+)
Gene ID: A103_contig_1100_1470
Type: TC
Location: 1878677 - 1880230 (+)
Gene ID: A103_contig_1100_1471
Type: pfam
Location: 1880252 - 1881166 (+)
Gene ID: A103_contig_1100_1472
Type: pfam
Location: 1881192 - 1881623 (+)
Gene ID: A103_contig_1100_1473
Type: TC
Location: 1881628 - 1882785 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
A103_contig_1100_1469 vegan > omnivore 1.07521 0.04570

🧭 Explore Read Mapping of CGC

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