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Cluster: A103.bin_3_CGC30

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme A103_contig_1100 A103_contig_1100_1262 1600652 1601935 + GH39
CAZyme A103_contig_1100 A103_contig_1100_1263 1602240 1603685 - GH125
pfam A103_contig_1100 A103_contig_1100_1264 1603761 1604699 - Exo_endo_phos
CAZyme A103_contig_1100 A103_contig_1100_1265 1604737 1607022 - GH92
pfam A103_contig_1100 A103_contig_1100_1266 1607295 1607711 + RuvX
pfam A103_contig_1100 A103_contig_1100_1267 1607715 1608281 + Pep_deformylase
TC A103_contig_1100 A103_contig_1100_1268 1608311 1609996 + 3.A.1.120.6
Gene ID: A103_contig_1100_1262
Type: CAZyme
Location: 1600652 - 1601935 (+)
Gene ID: A103_contig_1100_1263
Type: CAZyme
Location: 1602240 - 1603685 (-)
Gene ID: A103_contig_1100_1264
Type: pfam
Location: 1603761 - 1604699 (-)
Gene ID: A103_contig_1100_1265
Type: CAZyme
Location: 1604737 - 1607022 (-)
Gene ID: A103_contig_1100_1266
Type: pfam
Location: 1607295 - 1607711 (+)
Gene ID: A103_contig_1100_1267
Type: pfam
Location: 1607715 - 1608281 (+)
Gene ID: A103_contig_1100_1268
Type: TC
Location: 1608311 - 1609996 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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