Cluster: A103.bin_3_CGC11
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: A103.bin_3
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | A103_contig_1100 | A103_contig_1100_557 | 652778 | 655276 | + | GH20 |
| pfam | A103_contig_1100 | A103_contig_1100_558 | 655476 | 656480 | - | Semialdhyde_dh | Semialdhyde_dhC |
| TC | A103_contig_1100 | A103_contig_1100_559 | 656795 | 658948 | + | 2.A.37.2.5 |
| pfam | A103_contig_1100 | A103_contig_1100_560 | 659915 | 660187 | - | Bac_DNA_binding | HU-HIG |
| peptidase | A103_contig_1100 | A103_contig_1100_561 | 660440 | 661138 | + | S54.UPW |
| TC | A103_contig_1100 | A103_contig_1100_562 | 661119 | 662012 | + | 9.B.104.1.2 |
Gene ID: A103_contig_1100_557
Type: CAZyme
Location: 652778 - 655276 (+)
Type: CAZyme
Location: 652778 - 655276 (+)
Gene ID: A103_contig_1100_558
Type: pfam
Location: 655476 - 656480 (-)
Type: pfam
Location: 655476 - 656480 (-)
Gene ID: A103_contig_1100_559
Type: TC
Location: 656795 - 658948 (+)
Type: TC
Location: 656795 - 658948 (+)
Gene ID: A103_contig_1100_560
Type: pfam
Location: 659915 - 660187 (-)
Type: pfam
Location: 659915 - 660187 (-)
Gene ID: A103_contig_1100_561
Type: peptidase
Location: 660440 - 661138 (+)
Type: peptidase
Location: 660440 - 661138 (+)
Gene ID: A103_contig_1100_562
Type: TC
Location: 661119 - 662012 (+)
Type: TC
Location: 661119 - 662012 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Barnesiellaceae
Genus
Barnesiella
Species
Barnesiella intestinihominis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| A103_contig_1100_560 | vegan > omnivore | 1.37401 | 0.02265 |