y
Basic Information | |
---|---|
Species | Citrus sinensis |
Cazyme ID | orange1.1g036715m |
Family | GH10 |
Protein Properties | Length: 363 Molecular Weight: 41135.9 Isoelectric Point: 7.6755 |
Chromosome | Chromosome/Scaffold: 00023 Start: 372562 End: 373771 |
Description | Glycosyl hydrolase family 10 protein |
View CDS |
External Links |
---|
CAZyDB |
Signature Domain Download full data set without filtering | |||
---|---|---|---|
Family | Start | End | Evalue |
GH10 | 21 | 301 | 0 |
VSKDFPLGSAIASTILGNLPYQKWFVKRFNAAVFENELKWYATEAEQGKVNYTVADQMMEFVRANKLIVRGHNIFWENPKYNPTWVRNLTGFQLQSAVNS RIQSLMNKYKEEFIHWDVSNEILHFDFYEQRLGPKAALHFFQTAHQSDPLATLFMNEYNVVETCSDVNSMVDSYISRLRELRRSGVSTDGIGLQGHFTVP NLPLMRAIIDKMTTLKLPIWLTEVDISSKLSKEKQAVYLEQVLREGFSHPSVSGIMLWAALHPNGCYQMCLTDNNLQNLPA |
Full Sequence |
---|
Protein Sequence Length: 363 Download |
MHVTNGHGDI LQGAVIKIKQ VSKDFPLGSA IASTILGNLP YQKWFVKRFN AAVFENELKW 60 YATEAEQGKV NYTVADQMME FVRANKLIVR GHNIFWENPK YNPTWVRNLT GFQLQSAVNS 120 RIQSLMNKYK EEFIHWDVSN EILHFDFYEQ RLGPKAALHF FQTAHQSDPL ATLFMNEYNV 180 VETCSDVNSM VDSYISRLRE LRRSGVSTDG IGLQGHFTVP NLPLMRAIID KMTTLKLPIW 240 LTEVDISSKL SKEKQAVYLE QVLREGFSHP SVSGIMLWAA LHPNGCYQMC LTDNNLQNLP 300 AGDVVDKLLK ECQTGEVTGH TDAHGSYSFY GFLVSVKYGN RTANSTFSLC RGDETRHVTI 360 RL* 420 |
Functional Domains Download unfiltered results here | ||||||||
---|---|---|---|---|---|---|---|---|
Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
COG3693 | XynA | 3.0e-41 | 13 | 247 | 250 | + Beta-1,4-xylanase [Carbohydrate transport and metabolism] | ||
pfam00331 | Glyco_hydro_10 | 9.0e-60 | 17 | 278 | 279 | + Glycosyl hydrolase family 10. | ||
smart00633 | Glyco_10 | 1.0e-77 | 58 | 305 | 269 | + Glycosyl hydrolase family 10. |
Gene Ontology | |
---|---|
GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CAB37521.1 | 0 | 1 | 362 | 67 | 433 | putative protein [Arabidopsis thaliana] |
EMBL | CBI37893.1 | 0 | 1 | 362 | 260 | 625 | unnamed protein product [Vitis vinifera] |
RefSeq | NP_195577.2 | 0 | 1 | 362 | 196 | 562 | glycosyl hydrolase family 10 protein [Arabidopsis thaliana] |
RefSeq | XP_002277675.1 | 0 | 1 | 362 | 184 | 549 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002534153.1 | 0 | 1 | 362 | 108 | 473 | Endo-1,4-beta-xylanase A precursor, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1v6y_A | 6e-28 | 27 | 279 | 16 | 276 | A Chain A, Crystal Structure Of Chimeric Xylanase Between Streptomyces Olivaceoviridis E-86 Fxyn And Cellulomonas Fimi Cex |
PDB | 2g4f_B | 1e-27 | 27 | 257 | 16 | 250 | A Chain A, Crystal Structure Of Chimeric Xylanase Between Streptomyces Olivaceoviridis E-86 Fxyn And Cellulomonas Fimi Cex |
PDB | 2g4f_A | 1e-27 | 27 | 257 | 16 | 250 | A Chain A, Crystal Structure Of Chimeric Xylanase Between Streptomyces Olivaceoviridis E-86 Fxyn And Cellulomonas Fimi Cex |
PDB | 2g3j_A | 1e-27 | 27 | 257 | 16 | 250 | A Chain A, Crystal Structure Of Chimeric Xylanase Between Streptomyces Olivaceoviridis E-86 Fxyn And Cellulomonas Fimi Cex |
PDB | 2g3i_A | 1e-27 | 27 | 257 | 16 | 250 | A Chain A, Structure Of S.Olivaceoviridis Xylanase Q88aR275A MUTANT |
EST Download unfiltered results here | ||||
---|---|---|---|---|
Hit | Length | Start | End | EValue |
ES803339 | 253 | 12 | 264 | 0 |
GR953916 | 292 | 1 | 292 | 0 |
GO498667 | 216 | 100 | 315 | 0 |
CX705541 | 238 | 130 | 363 | 0 |
DV530577 | 250 | 41 | 290 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
---|