y
Basic Information | |
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Species | Mimulus guttatus |
Cazyme ID | mgv1a004157m |
Family | GH10 |
Protein Properties | Length: 542 Molecular Weight: 61042.5 Isoelectric Point: 6.7992 |
Chromosome | Chromosome/Scaffold: 164 Start: 91111 End: 93932 |
Description | Glycosyl hydrolase family 10 protein |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH10 | 190 | 452 | 0 |
QNNANFPFGTAINKNIIGNSAYQNWFFSRFKYTVFENELKWVSTEYNRGSVDYSVPDAMIALAKSHGVTMRGHNVLWDEPQYQPYWVPGLSANDLAAAAQ KRLISVMTKYKGRFIHWDVVNENLHWNFFESRLGPNISTVYYKYANKIDGSRTIPFLNEFNTIEESTDGVASPSRYLQKIDEMRRGRYGGPLGIGAQGHF GNLNLPYTRSALDMLASAKLPLWVTELDVKPGPNQAIFLNQALREIHSHYAVQGIMMWTAWSP |
Full Sequence |
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Protein Sequence Length: 542 Download |
MCLAKPLKPQ YEGGVIVNPE LNEGLKGWTK FEDSTVEHRE SDDGNKYIVA SARKQPFHSF 60 SQKFNLEKEK LYTFSAWLQV SNEDAYIAAI FKTNTSNVYA GWITAHKGCW SMVKGGLVVN 120 VSGPAELYFE SNNTNVDIWA DSISLQPFTQ QEWKSHQDQS IEKFRKSKVK FQAVDQHGQP 180 IPNATVSIKQ NNANFPFGTA INKNIIGNSA YQNWFFSRFK YTVFENELKW VSTEYNRGSV 240 DYSVPDAMIA LAKSHGVTMR GHNVLWDEPQ YQPYWVPGLS ANDLAAAAQK RLISVMTKYK 300 GRFIHWDVVN ENLHWNFFES RLGPNISTVY YKYANKIDGS RTIPFLNEFN TIEESTDGVA 360 SPSRYLQKID EMRRGRYGGP LGIGAQGHFG NLNLPYTRSA LDMLASAKLP LWVTELDVKP 420 GPNQAIFLNQ ALREIHSHYA VQGIMMWTAW SPQGCYTMCL TDSNFRNLDT GNVVDGFRNE 480 LTHADGLRGT TDSNGFFEAS LFHGEYEAKI INGDAVSSPQ EINVVPNGET VVDVHRLTVN 540 V* 600 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam02018 | CBM_4_9 | 0.001 | 22 | 131 | 120 | + Carbohydrate binding domain. This family includes diverse carbohydrate binding domains. | ||
COG3693 | XynA | 2.0e-25 | 190 | 418 | 242 | + Beta-1,4-xylanase [Carbohydrate transport and metabolism] | ||
pfam00331 | Glyco_hydro_10 | 1.0e-39 | 192 | 465 | 304 | + Glycosyl hydrolase family 10. | ||
smart00633 | Glyco_10 | 2.0e-53 | 228 | 474 | 272 | + Glycosyl hydrolase family 10. |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
GO:0016798 | hydrolase activity, acting on glycosyl bonds |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CBI22450.1 | 0 | 1 | 510 | 590 | 1096 | unnamed protein product [Vitis vinifera] |
EMBL | CBI22450.1 | 0 | 2 | 512 | 57 | 563 | unnamed protein product [Vitis vinifera] |
RefSeq | XP_002264556.1 | 0 | 2 | 512 | 120 | 626 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002313180.1 | 0 | 2 | 512 | 3 | 512 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002532418.1 | 0 | 2 | 526 | 31 | 556 | Endo-1,4-beta-xylanase C precursor, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1nq6_A | 3e-24 | 197 | 447 | 15 | 268 | A Chain A, Crystal Structure Of The Catalytic Domain Of Xylanase A From Streptomyces Halstedii Jm8 |
PDB | 1i1x_A | 7e-19 | 197 | 465 | 18 | 288 | A Chain A, Crystal Structure Of The Catalytic Domain Of Xylanase A From Streptomyces Halstedii Jm8 |
PDB | 1i1w_A | 7e-19 | 197 | 465 | 18 | 288 | A Chain A, 0.89a Ultra High Resolution Structure Of A Thermostable Xylanase From Thermoascus Aurantiacus |
PDB | 2bnj_A | 1e-18 | 197 | 465 | 18 | 288 | A Chain A, The Xylanase Ta From Thermoascus Aurantiacus Utilizes Arabinose Decorations Of Xylan As Significant Substrate Specificity Determinants |
PDB | 1gor_A | 1e-18 | 197 | 465 | 18 | 288 | A Chain A, The Xylanase Ta From Thermoascus Aurantiacus Utilizes Arabinose Decorations Of Xylan As Significant Substrate Specificity Determinants |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
GR150167 | 264 | 5 | 268 | 0 |
GR160803 | 262 | 38 | 299 | 0 |
GR188156 | 245 | 153 | 397 | 0 |
GR150168 | 224 | 319 | 542 | 0 |
GR160804 | 218 | 325 | 542 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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