y
Basic Information | |
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Species | Mimulus guttatus |
Cazyme ID | mgv1a023132m |
Family | GH10 |
Protein Properties | Length: 356 Molecular Weight: 40458.3 Isoelectric Point: 9.4896 |
Chromosome | Chromosome/Scaffold: 1052 Start: 8059 End: 10728 |
Description | Glycosyl hydrolase family 10 protein |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH10 | 72 | 332 | 0 |
RRPNFPVGCAINQNILQNSAYQNWFTSRFKYTVFENELKWYSNERSRGSEDYSASDALVKFAQSRGVAVRGHNVFWANPADQPNWVPGLSSNDLWAASNK RINSVMGRYRGQLFHWDVMNENLHFNFFETKLGWNASTIFYGKANAIDGKTTPFLNEYNTIEESGDGTSSPSKYLQKISEMRKNGYNGPLGIGAQGHFTN ANLPYLRSAIDQLASAKLPIWVTELDVKSGPNQASYLEKILWEIHSHSAVQGIIIWSAWSP |
Full Sequence |
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Protein Sequence Length: 356 Download |
MSTLTSFFHL QSNNTKVDIW ADSISLQPFT HQEWKSHQQQ NIEKFRKSKV KFQAVDKHGQ 60 PIPNATVSIK QRRPNFPVGC AINQNILQNS AYQNWFTSRF KYTVFENELK WYSNERSRGS 120 EDYSASDALV KFAQSRGVAV RGHNVFWANP ADQPNWVPGL SSNDLWAASN KRINSVMGRY 180 RGQLFHWDVM NENLHFNFFE TKLGWNASTI FYGKANAIDG KTTPFLNEYN TIEESGDGTS 240 SPSKYLQKIS EMRKNGYNGP LGIGAQGHFT NANLPYLRSA IDQLASAKLP IWVTELDVKS 300 GPNQASYLEK ILWEIHSHSA VQGIIIWSAW SPNGCYVMCL TDNNFRNLAT GNIVDK 360 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
COG3693 | XynA | 3.0e-27 | 106 | 298 | 214 | + Beta-1,4-xylanase [Carbohydrate transport and metabolism] | ||
pfam00331 | Glyco_hydro_10 | 2.0e-41 | 75 | 327 | 273 | + Glycosyl hydrolase family 10. | ||
smart00633 | Glyco_10 | 2.0e-62 | 109 | 352 | 269 | + Glycosyl hydrolase family 10. |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | AAN10199.1 | 0 | 8 | 356 | 164 | 514 | endoxylanase [Carica papaya] |
EMBL | CBI22450.1 | 0 | 8 | 356 | 181 | 528 | unnamed protein product [Vitis vinifera] |
RefSeq | XP_002264556.1 | 0 | 8 | 356 | 244 | 591 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002313180.1 | 0 | 8 | 356 | 127 | 478 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002532418.1 | 0 | 8 | 356 | 155 | 505 | Endo-1,4-beta-xylanase C precursor, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1nq6_A | 5e-29 | 79 | 327 | 16 | 268 | A Chain A, Crystal Structure Of The Catalytic Domain Of Xylanase A From Streptomyces Halstedii Jm8 |
PDB | 1tux_A | 1e-24 | 79 | 345 | 19 | 288 | A Chain A, High Resolution Crystal Structure Of A Thermostable Xylanase From Thermoascus Aurantiacus |
PDB | 1k6a_A | 1e-23 | 79 | 345 | 19 | 288 | A Chain A, Structural Studies On The Mobility In The Active Site Of The Thermoascus Aurantiacus Xylanase I |
PDB | 1gor_A | 1e-23 | 79 | 345 | 19 | 288 | A Chain A, Structural Studies On The Mobility In The Active Site Of The Thermoascus Aurantiacus Xylanase I |
PDB | 1goq_A | 1e-23 | 79 | 345 | 19 | 288 | A Chain A, Structural Studies On The Mobility In The Active Site Of The Thermoascus Aurantiacus Xylanase I |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
GR187811 | 212 | 145 | 356 | 0 |
GR188156 | 244 | 34 | 276 | 0 |
GR186303 | 239 | 118 | 356 | 0 |
EX266128 | 268 | 91 | 356 | 0 |
EY176579 | 267 | 67 | 332 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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