y
Basic Information | |
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Species | Setaria italica |
Cazyme ID | Si009718m |
Family | GH47 |
Protein Properties | Length: 565 Molecular Weight: 64254.4 Isoelectric Point: 6.0129 |
Chromosome | Chromosome/Scaffold: 7 Start: 29280872 End: 29286346 |
Description | alpha-mannosidase 1 |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH47 | 108 | 540 | 0 |
AMLHAWNSYVKYAWGMDELQPQSKNGINSFGGLGATLVDSLDTLYIMGLKDEFQKARDWVAESLDFDKDYDASVFETTIRVVGGLLSAYDLSGDKVFLDK AKDITDRLLPAWDTTSGIPYNRINLAHGRAHNPGWTNGDSILADSGTEQLEFIALSQRTGDPKYQQKAENVVRQLQKIYPSDGLLPIYINPHSGTASYST ITFGAMGDSFYEYLLKVWIQGNKTEHVKHYRQMWETSMEGLVSLTKKTTPSNYYYICEKNGGSLSDKMDELACFAPGMLALGASGYESPEKSEEIMNLAK ELARTCYNFYQTTPTKLAGENYFFHSGQDMSVGTSWNILRPETVESLMYLWRLTGNKTYQDWGWNIFQAFEKNSRIESGYVGLRDVNTGEKDNMMQSFFL AETLKYLYLLFSPPSVISFDEWVFNTEAHPLRI |
Full Sequence |
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Protein Sequence Length: 565 Download |
MARRSSSSSS GAWRYLNPAY YLKRPKRLAL LFFVFVAATF AFWDRQSLVS EYEAEISRLE 60 DDINRLHDQL RKAGVHLDEN PISNKNSRKD LVEIDPVNNE RREKVKEAML HAWNSYVKYA 120 WGMDELQPQS KNGINSFGGL GATLVDSLDT LYIMGLKDEF QKARDWVAES LDFDKDYDAS 180 VFETTIRVVG GLLSAYDLSG DKVFLDKAKD ITDRLLPAWD TTSGIPYNRI NLAHGRAHNP 240 GWTNGDSILA DSGTEQLEFI ALSQRTGDPK YQQKAENVVR QLQKIYPSDG LLPIYINPHS 300 GTASYSTITF GAMGDSFYEY LLKVWIQGNK TEHVKHYRQM WETSMEGLVS LTKKTTPSNY 360 YYICEKNGGS LSDKMDELAC FAPGMLALGA SGYESPEKSE EIMNLAKELA RTCYNFYQTT 420 PTKLAGENYF FHSGQDMSVG TSWNILRPET VESLMYLWRL TGNKTYQDWG WNIFQAFEKN 480 SRIESGYVGL RDVNTGEKDN MMQSFFLAET LKYLYLLFSP PSVISFDEWV FNTEAHPLRI 540 VPIHDNKGIG TPVRPFGRKQ GKPE* 600 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam01532 | Glyco_hydro_47 | 0 | 108 | 540 | 452 | + Glycosyl hydrolase family 47. Members of this family are alpha-mannosidases that catalyze the hydrolysis of the terminal 1,2-linked alpha-D-mannose residues in the oligo-mannose oligosaccharide Man(9)(GlcNAc)(2). | ||
PTZ00470 | PTZ00470 | 0 | 98 | 542 | 455 | + glycoside hydrolase family 47 protein; Provisional |
Gene Ontology | |
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GO Term | Description |
GO:0004571 | mannosyl-oligosaccharide 1,2-alpha-mannosidase activity |
GO:0005509 | calcium ion binding |
GO:0016020 | membrane |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ACN34773.1 | 0 | 1 | 564 | 1 | 565 | unknown [Zea mays] |
EMBL | CAH66776.1 | 0 | 1 | 564 | 1 | 572 | OSIGBa0113I13.2 [Oryza sativa (indica cultivar-group)] |
EMBL | CBI18472.1 | 0 | 1 | 564 | 1 | 569 | unnamed protein product [Vitis vinifera] |
RefSeq | NP_001053800.1 | 0 | 1 | 564 | 1 | 572 | Os04g0606400 [Oryza sativa (japonica cultivar-group)] |
RefSeq | XP_002448484.1 | 0 | 1 | 564 | 1 | 564 | hypothetical protein SORBIDRAFT_06g027810 [Sorghum bicolor] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1nxc_A | 0 | 95 | 541 | 14 | 466 | A Chain A, Structure Of Mouse Golgi Alpha-1,2-Mannosidase Ia Reveals The Molecular Basis For Substrate Specificity Among Class I Enzymes (Family 47 Glycosidases) |
PDB | 1fo3_A | 0 | 96 | 540 | 4 | 456 | A Chain A, Structure Of Mouse Golgi Alpha-1,2-Mannosidase Ia Reveals The Molecular Basis For Substrate Specificity Among Class I Enzymes (Family 47 Glycosidases) |
PDB | 1fo2_A | 0 | 96 | 540 | 4 | 456 | A Chain A, Crystal Structure Of Human Class I Alpha1,2-Mannosidase In Complex With 1-Deoxymannojirimycin |
PDB | 1fmi_A | 0 | 96 | 540 | 4 | 456 | A Chain A, Crystal Structure Of Human Class I Alpha1,2-Mannosidase |
PDB | 1x9d_A | 0 | 96 | 540 | 82 | 534 | A Chain A, Crystal Structure Of Human Class I Alpha-1,2-Mannosidase In Complex With Thio-Disaccharide Substrate Analogue |