y
Basic Information | |
---|---|
Species | Brassica rapa |
Cazyme ID | Bra018917 |
Family | GH47 |
Protein Properties | Length: 562 Molecular Weight: 63865.5 Isoelectric Point: 5.3497 |
Chromosome | Chromosome/Scaffold: 06 Start: 1277766 End: 1281679 |
Description | alpha-mannosidase 1 |
View CDS |
External Links |
---|
NCBI Taxonomy |
CAZyDB |
Signature Domain Download full data set without filtering | |||
---|---|---|---|
Family | Start | End | Evalue |
GH47 | 104 | 536 | 0 |
AMIHAWSSYEKYAWGKDELQPRTKDGTDSFGGLGATMIDSLDTLYIMGLDEQFQKAREWVATSLDFDKDYDASMFETTIRVVGGLLSTYDLSGDKIFLEK AKDIADRLLPAWNTPTGIPYNIINLRSGSAHNPSWAAGGDSILADSGTEQLEFIALSQRTGDPKYQQKVEKVITELNKNFPADGLLPIYISPDNANPSYS TITFGAMGDSFYEYLLKVWVQGNKTSEVKLYREMWEKSMKGLLSLIKKSTPSSFTYIQEKNGNSYNDKMDELACFAPGMLALGASGYGPDEEKKFLTLAE ELAWTCYNFYQSTPTKLAGENYYFSAGQDMSVGTSWNILRPETVESLFYLWRLTGNKTYQEWGWNIFQAFEKNSRIESGYVGLKDVNTGAKDNKMQSFFL AETLKYLYLLFSPSSVISLDEWVFNTEAHPLKI |
Full Sequence |
---|
Protein Sequence Length: 562 Download |
MARSRSISGS GVWKYLNPAY YLRRPRRLAL LFFLFVSVSM VVWDRMNLAR EHEVEVIKLT 60 EEVLRLEQML EELKGVGDGK TLMTHKDVPE DPVDVERRQK VKEAMIHAWS SYEKYAWGKD 120 ELQPRTKDGT DSFGGLGATM IDSLDTLYIM GLDEQFQKAR EWVATSLDFD KDYDASMFET 180 TIRVVGGLLS TYDLSGDKIF LEKAKDIADR LLPAWNTPTG IPYNIINLRS GSAHNPSWAA 240 GGDSILADSG TEQLEFIALS QRTGDPKYQQ KVEKVITELN KNFPADGLLP IYISPDNANP 300 SYSTITFGAM GDSFYEYLLK VWVQGNKTSE VKLYREMWEK SMKGLLSLIK KSTPSSFTYI 360 QEKNGNSYND KMDELACFAP GMLALGASGY GPDEEKKFLT LAEELAWTCY NFYQSTPTKL 420 AGENYYFSAG QDMSVGTSWN ILRPETVESL FYLWRLTGNK TYQEWGWNIF QAFEKNSRIE 480 SGYVGLKDVN TGAKDNKMQS FFLAETLKYL YLLFSPSSVI SLDEWVFNTE AHPLKIVPRN 540 NDQRKPTITL RQRRFGGEIK G* 600 |
Functional Domains Download unfiltered results here | ||||||||
---|---|---|---|---|---|---|---|---|
Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam01532 | Glyco_hydro_47 | 0 | 104 | 536 | 452 | + Glycosyl hydrolase family 47. Members of this family are alpha-mannosidases that catalyze the hydrolysis of the terminal 1,2-linked alpha-D-mannose residues in the oligo-mannose oligosaccharide Man(9)(GlcNAc)(2). | ||
PTZ00470 | PTZ00470 | 0 | 94 | 540 | 458 | + glycoside hydrolase family 47 protein; Provisional |
Gene Ontology | |
---|---|
GO Term | Description |
GO:0004571 | mannosyl-oligosaccharide 1,2-alpha-mannosidase activity |
GO:0005509 | calcium ion binding |
GO:0016020 | membrane |
Annotations - NR Download unfiltered results here | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | AAK92711.1 | 0 | 1 | 556 | 1 | 567 | putative mannosidase [Arabidopsis thaliana] |
DDBJ | BAB01459.1 | 0 | 1 | 556 | 1 | 576 | alpha 1,2-mannosidase-like protein [Arabidopsis thaliana] |
RefSeq | NP_001031171.1 | 0 | 105 | 559 | 1 | 454 | mannosyl-oligosaccharide 1,2-alpha-mannosidase, putative [Arabidopsis thaliana] |
RefSeq | NP_175570.1 | 0 | 1 | 559 | 1 | 558 | mannosyl-oligosaccharide 1,2-alpha-mannosidase, putative [Arabidopsis thaliana] |
RefSeq | NP_566675.1 | 0 | 1 | 556 | 1 | 567 | mannosyl-oligosaccharide 1,2-alpha-mannosidase, putative [Arabidopsis thaliana] |
Annotations - PDB Download unfiltered results here | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1nxc_A | 0 | 89 | 537 | 12 | 466 | A Chain A, Structure Of Mouse Golgi Alpha-1,2-Mannosidase Ia Reveals The Molecular Basis For Substrate Specificity Among Class I Enzymes (Family 47 Glycosidases) |
PDB | 1fmi_A | 0 | 90 | 536 | 2 | 456 | A Chain A, Crystal Structure Of Human Class I Alpha1,2-Mannosidase |
PDB | 1fo3_A | 0 | 90 | 536 | 2 | 456 | A Chain A, Crystal Structure Of Human Class I Alpha1,2-Mannosidase |
PDB | 1fo2_A | 0 | 90 | 536 | 2 | 456 | A Chain A, Crystal Structure Of Human Class I Alpha1,2-Mannosidase In Complex With 1-Deoxymannojirimycin |
PDB | 1x9d_A | 0 | 92 | 536 | 82 | 534 | A Chain A, Crystal Structure Of Human Class I Alpha-1,2-Mannosidase In Complex With Thio-Disaccharide Substrate Analogue |