y
Basic Information | |
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Species | Populus trichocarpa |
Cazyme ID | Potri.004G132300.2 |
Family | GH47 |
Protein Properties | Length: 554 Molecular Weight: 61608.3 Isoelectric Point: 6.9057 |
Chromosome | Chromosome/Scaffold: 04 Start: 15089916 End: 15096977 |
Description | alpha-mannosidase 3 |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH47 | 144 | 551 | 0 |
AFIHAWSGYKMYAMGYDELMPLSQQGVDGLGGLGATVVDALDTALIMGADEVVSEAGLWIETHLSDRISKKGQVNLFETTIRVLGGLLSAYHLSGGEQGT NLTHKGPKPTVYLETARNLADRLLLAFTSSPTSIPFSDVVLHDPSAHRAPDGLSSTAEVSTVQLEFNYLSTVSGDPRYSIEAMKVLEHIKDLPKVEGLVP IYISPDSGEFSGENIRLGSRGDSYYEYLIKVWLQQGRNRDSNFTYLYDMYEEAMKGVRHLLVQKSIPNGLVFVGELPYGPKGSFSPKMDHLVCFLPGTLA LGATKGLTKEKAMKENLLKFEDLENLKLAEDLAKTCFEMYSVTSTGLAPEIAYFHTEEYSEHGLDGGNKNSKFVNDIIIKHADRHNLLRPETVESLFILY RITEDPKY |
Full Sequence |
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Protein Sequence Length: 554 Download |
MSKSLPYSMK DVHYDNAKFR QRSFVKVITQ SLLTSNAKHD CLSCSTGKFL ALLMIFGLAC 60 LMFTHKSTPH SVSQGQAEGI KVNKEVKGIS DSGGRFQRFW RKPPRLPPQL PPDEKGSIDN 120 LPHELQKLNT DSKWVDRQQR VQKAFIHAWS GYKMYAMGYD ELMPLSQQGV DGLGGLGATV 180 VDALDTALIM GADEVVSEAG LWIETHLSDR ISKKGQVNLF ETTIRVLGGL LSAYHLSGGE 240 QGTNLTHKGP KPTVYLETAR NLADRLLLAF TSSPTSIPFS DVVLHDPSAH RAPDGLSSTA 300 EVSTVQLEFN YLSTVSGDPR YSIEAMKVLE HIKDLPKVEG LVPIYISPDS GEFSGENIRL 360 GSRGDSYYEY LIKVWLQQGR NRDSNFTYLY DMYEEAMKGV RHLLVQKSIP NGLVFVGELP 420 YGPKGSFSPK MDHLVCFLPG TLALGATKGL TKEKAMKENL LKFEDLENLK LAEDLAKTCF 480 EMYSVTSTGL APEIAYFHTE EYSEHGLDGG NKNSKFVNDI IIKHADRHNL LRPETVESLF 540 ILYRITEDPK YAL* 600 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PTZ00470 | PTZ00470 | 5.0e-124 | 124 | 551 | 431 | + glycoside hydrolase family 47 protein; Provisional | ||
pfam01532 | Glyco_hydro_47 | 2.0e-151 | 144 | 551 | 411 | + Glycosyl hydrolase family 47. Members of this family are alpha-mannosidases that catalyze the hydrolysis of the terminal 1,2-linked alpha-D-mannose residues in the oligo-mannose oligosaccharide Man(9)(GlcNAc)(2). |
Gene Ontology | |
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GO Term | Description |
GO:0004571 | mannosyl-oligosaccharide 1,2-alpha-mannosidase activity |
GO:0005509 | calcium ion binding |
GO:0016020 | membrane |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | AAG52061.1 | 0 | 129 | 551 | 57 | 480 | AC022455_15 endoplasmic reticulum alpha-mannosidase, putative; 33510-31408 [Arabidopsis thaliana] |
RefSeq | NP_564345.1 | 0 | 1 | 551 | 1 | 543 | glycoside hydrolase family 47 protein [Arabidopsis thaliana] |
RefSeq | XP_002275664.1 | 0 | 1 | 551 | 1 | 555 | PREDICTED: similar to glycoside hydrolase family 47 protein [Vitis vinifera] |
RefSeq | XP_002306001.1 | 0 | 1 | 551 | 1 | 551 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002519694.1 | 0 | 1 | 551 | 1 | 542 | endoplasmic reticulum mannosyl-oligosaccharide 1,2-alpha-mannosidase, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1fmi_A | 0 | 137 | 551 | 10 | 377 | A Chain A, Crystal Structure Of Human Class I Alpha1,2-Mannosidase |
PDB | 1fo3_A | 0 | 137 | 551 | 10 | 377 | A Chain A, Crystal Structure Of Human Class I Alpha1,2-Mannosidase |
PDB | 1fo2_A | 0 | 137 | 551 | 10 | 377 | A Chain A, Crystal Structure Of Human Class I Alpha1,2-Mannosidase In Complex With 1-Deoxymannojirimycin |
PDB | 1x9d_A | 0 | 137 | 551 | 88 | 455 | A Chain A, Crystal Structure Of Human Class I Alpha-1,2-Mannosidase In Complex With Thio-Disaccharide Substrate Analogue |
PDB | 1g6i_A | 0 | 138 | 551 | 40 | 448 | A Chain A, Crystal Structure Of The Yeast Alpha-1,2-Mannosidase With Bound 1- Deoxymannojirimycin At 1.59 A Resolution |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
EX266875 | 313 | 239 | 551 | 0 |
DT336345 | 318 | 181 | 498 | 0 |
ES806438 | 353 | 196 | 545 | 0 |
DY674110 | 287 | 244 | 530 | 0 |
EC919849 | 293 | 113 | 405 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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