y
Basic Information | |
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Species | Populus trichocarpa |
Cazyme ID | Potri.012G076600.1 |
Family | GH47 |
Protein Properties | Length: 572 Molecular Weight: 65453.6 Isoelectric Point: 6.4342 |
Chromosome | Chromosome/Scaffold: 12 Start: 10195660 End: 10204223 |
Description | Glycosyl hydrolase family 47 protein |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH47 | 43 | 476 | 0 |
MFYHAYENYMTHAFPHDELKPLTRSFTDSLSELGNLKLEHLPQNYNGTALTLIESLSSLVILGNYTEFERAVLWLSENLSFDVDARVNLFEGNIRVLGGL VSAHILATDSNRLVQGSYKNQLLDLAEDLGQRFLPAFDTPTGLPYAWINLKYGVMKNETTETSTSGCGSLILEMGALSRLTGDPKYESASLRALRKLWSM RSSLNLLGTTLDVETGEWIEHSSGIGAGVDSFYEYLFKAHILFGKEDFWRMFHSAYLAVQKYFRHGPWYHEADMRTGKATYWQLTSLQAFWPGLQVLVGD IEAANSSHREFVHVWKKFGVLPERYLLDHQMLHPTEKYYPLRPELAESTFYLYQATKDPWYIEVGEAIVDSLNLYTKVEGGFASIRDVTTMQTEDHQHSF FLAETCKYLYLLFDDSFLVDRNYIFTTEGHPLPV |
Full Sequence |
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Protein Sequence Length: 572 Download |
MSICRFLKWV VLLLVIFPSL FDPSLSHFDS AKKKQMREKV RKMFYHAYEN YMTHAFPHDE 60 LKPLTRSFTD SLSELGNLKL EHLPQNYNGT ALTLIESLSS LVILGNYTEF ERAVLWLSEN 120 LSFDVDARVN LFEGNIRVLG GLVSAHILAT DSNRLVQGSY KNQLLDLAED LGQRFLPAFD 180 TPTGLPYAWI NLKYGVMKNE TTETSTSGCG SLILEMGALS RLTGDPKYES ASLRALRKLW 240 SMRSSLNLLG TTLDVETGEW IEHSSGIGAG VDSFYEYLFK AHILFGKEDF WRMFHSAYLA 300 VQKYFRHGPW YHEADMRTGK ATYWQLTSLQ AFWPGLQVLV GDIEAANSSH REFVHVWKKF 360 GVLPERYLLD HQMLHPTEKY YPLRPELAES TFYLYQATKD PWYIEVGEAI VDSLNLYTKV 420 EGGFASIRDV TTMQTEDHQH SFFLAETCKY LYLLFDDSFL VDRNYIFTTE GHPLPVLSAW 480 HERLPEIYIP SNWTYVKKEK PKRASAMSLQ VCPALSLNSR HGEQLVESAC HIPDARNDHK 540 CFSDEECGVD STSCRRRSCS LGGYCGLWLI I* 600 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PTZ00470 | PTZ00470 | 5.0e-83 | 18 | 476 | 495 | + glycoside hydrolase family 47 protein; Provisional | ||
pfam01532 | Glyco_hydro_47 | 3.0e-158 | 43 | 476 | 471 | + Glycosyl hydrolase family 47. Members of this family are alpha-mannosidases that catalyze the hydrolysis of the terminal 1,2-linked alpha-D-mannose residues in the oligo-mannose oligosaccharide Man(9)(GlcNAc)(2). |
Gene Ontology | |
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GO Term | Description |
GO:0004571 | mannosyl-oligosaccharide 1,2-alpha-mannosidase activity |
GO:0005509 | calcium ion binding |
GO:0016020 | membrane |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
RefSeq | NP_564288.1 | 0 | 9 | 568 | 11 | 571 | glycoside hydrolase family 47 protein [Arabidopsis thaliana] |
RefSeq | XP_002280345.1 | 0 | 6 | 571 | 6 | 573 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002318019.1 | 0 | 36 | 571 | 1 | 530 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002321565.1 | 0 | 1 | 570 | 1 | 566 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002511454.1 | 0 | 1 | 571 | 1 | 575 | Mannosyl-oligosaccharide 1,2-alpha-mannosidase IA, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1nxc_A | 0 | 31 | 477 | 15 | 466 | A Chain A, Structure Of Mouse Golgi Alpha-1,2-Mannosidase Ia Reveals The Molecular Basis For Substrate Specificity Among Class I Enzymes (Family 47 Glycosidases) |
PDB | 4ayr_A | 0 | 34 | 474 | 11 | 433 | A Chain A, Structure Of Mouse Golgi Alpha-1,2-Mannosidase Ia Reveals The Molecular Basis For Substrate Specificity Among Class I Enzymes (Family 47 Glycosidases) |
PDB | 4ayq_A | 0 | 34 | 474 | 11 | 433 | A Chain A, Structure Of Mouse Golgi Alpha-1,2-Mannosidase Ia Reveals The Molecular Basis For Substrate Specificity Among Class I Enzymes (Family 47 Glycosidases) |
PDB | 4ayp_A | 0 | 34 | 474 | 11 | 433 | A Chain A, Structure Of Mouse Golgi Alpha-1,2-Mannosidase Ia Reveals The Molecular Basis For Substrate Specificity Among Class I Enzymes (Family 47 Glycosidases) |
PDB | 4ayo_A | 0 | 34 | 474 | 11 | 433 | A Chain A, Structure Of The Gh47 Processing Alpha-1,2-mannosidase From Caulobacter Strain K31 |