y
Basic Information | |
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Species | Glycine max |
Cazyme ID | Glyma13g28910.1 |
Family | GH47 |
Protein Properties | Length: 635 Molecular Weight: 70421.3 Isoelectric Point: 6.737 |
Chromosome | Chromosome/Scaffold: 13 Start: 31885107 End: 31889574 |
Description | alpha-mannosidase 3 |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH47 | 146 | 630 | 0 |
AFIHAWSGYKKFAMGYDELMPLSQHGIDGLGGLGATVVDALDTAMIMGLDEVVAEAGSWVEEQLSERISKKGQVNLFETTIRVLGGLLSAYHLSGGEKGT NLTHAGPKPAVYLEIAKDLADRLLSAFTASPTAIPFSDVILHDKSAHPAPGGLSSTSEVSTLQLEFNYLSQISGDQKYSLEAMKVMEHMKTLPKIEGLVP IYISPHSGEFSGENIRLGSRGDSYYEYLIKVWLQSGASSNTNTSFLYEMYKEAMNGVRHLLVRKSIPNGLVFVGELPYGSNSGFSPKMDHLVCFLPGTLA IGATKGLTKKQAMENNMLNFEDLENLKLAEDLTKTCFEMYAVTSTGLAPEIAYFHTEEFSEEGHDGGNKSSEFVNDIIIKPADRHNLLRPETVESLFVLY RITEDPKYREWGWQIFEAFENHTKVDTGGYCSLDDVTSVPPHRRDKMETFFLGETLKYFYLLFADSSLIPLDKFVFNTEAHPIPI |
Full Sequence |
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Protein Sequence Length: 635 Download |
MSKSLPYSTK DVHYDNAKFR PRSFFKVVTQ NLLTSNLRRD CGSCSTGKFL FLLLIFGVAY 60 LMLAHASSSG VVSDDQAIVN RKSFYANSSI VNGAGKIKRL WRRPPRLPPR FSPDETGTGN 120 GNGHVLGNPD VVRSMWIARQ KKVKEAFIHA WSGYKKFAMG YDELMPLSQH GIDGLGGLGA 180 TVVDALDTAM IMGLDEVVAE AGSWVEEQLS ERISKKGQVN LFETTIRVLG GLLSAYHLSG 240 GEKGTNLTHA GPKPAVYLEI AKDLADRLLS AFTASPTAIP FSDVILHDKS AHPAPGGLSS 300 TSEVSTLQLE FNYLSQISGD QKYSLEAMKV MEHMKTLPKI EGLVPIYISP HSGEFSGENI 360 RLGSRGDSYY EYLIKVWLQS GASSNTNTSF LYEMYKEAMN GVRHLLVRKS IPNGLVFVGE 420 LPYGSNSGFS PKMDHLVCFL PGTLAIGATK GLTKKQAMEN NMLNFEDLEN LKLAEDLTKT 480 CFEMYAVTST GLAPEIAYFH TEEFSEEGHD GGNKSSEFVN DIIIKPADRH NLLRPETVES 540 LFVLYRITED PKYREWGWQI FEAFENHTKV DTGGYCSLDD VTSVPPHRRD KMETFFLGET 600 LKYFYLLFAD SSLIPLDKFV FNTEAHPIPI NLKK* 660 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PTZ00470 | PTZ00470 | 5.0e-179 | 137 | 630 | 497 | + glycoside hydrolase family 47 protein; Provisional | ||
pfam01532 | Glyco_hydro_47 | 0 | 146 | 630 | 488 | + Glycosyl hydrolase family 47. Members of this family are alpha-mannosidases that catalyze the hydrolysis of the terminal 1,2-linked alpha-D-mannose residues in the oligo-mannose oligosaccharide Man(9)(GlcNAc)(2). |
Gene Ontology | |
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GO Term | Description |
GO:0004571 | mannosyl-oligosaccharide 1,2-alpha-mannosidase activity |
GO:0005509 | calcium ion binding |
GO:0016020 | membrane |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
RefSeq | NP_001054909.1 | 0 | 5 | 630 | 11 | 634 | Os05g0209100 [Oryza sativa (japonica cultivar-group)] |
RefSeq | NP_564345.1 | 0 | 1 | 630 | 1 | 620 | glycoside hydrolase family 47 protein [Arabidopsis thaliana] |
RefSeq | XP_002275664.1 | 0 | 1 | 630 | 1 | 632 | PREDICTED: similar to glycoside hydrolase family 47 protein [Vitis vinifera] |
RefSeq | XP_002306001.1 | 0 | 1 | 630 | 1 | 628 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002519694.1 | 0 | 1 | 630 | 1 | 619 | endoplasmic reticulum mannosyl-oligosaccharide 1,2-alpha-mannosidase, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1fmi_A | 0 | 139 | 630 | 10 | 456 | A Chain A, Crystal Structure Of Human Class I Alpha1,2-Mannosidase |
PDB | 1fo3_A | 0 | 139 | 630 | 10 | 456 | A Chain A, Crystal Structure Of Human Class I Alpha1,2-Mannosidase |
PDB | 1fo2_A | 0 | 139 | 630 | 10 | 456 | A Chain A, Crystal Structure Of Human Class I Alpha1,2-Mannosidase In Complex With 1-Deoxymannojirimycin |
PDB | 1x9d_A | 0 | 139 | 630 | 88 | 534 | A Chain A, Crystal Structure Of Human Class I Alpha-1,2-Mannosidase In Complex With Thio-Disaccharide Substrate Analogue |
PDB | 1dl2_A | 0 | 140 | 630 | 6 | 494 | A Chain A, Crystal Structure Of Class I Alpha-1,2-Mannosidase From Saccharomyces Cerevisiae At 1.54 Angstrom Resolution |