y
Basic Information | |
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Species | Arabidopsis lyrata |
Cazyme ID | 494638 |
Family | GH47 |
Protein Properties | Length: 625 Molecular Weight: 70201 Isoelectric Point: 4.4952 |
Chromosome | Chromosome/Scaffold: 8 Start: 4111206 End: 4115570 |
Description | Glycosyl hydrolase family 47 protein |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH47 | 47 | 472 | 0 |
MFYHAFDGYMNNAFPLDELRPLSCQGEDTLGGYALTLIDSLDTLALLGDRERFTSSVEWIGKNLQFNINKTVSVFETTIRVLGGLLSAHLIASDYATGMR IPSYNNELLVLAEDLTRRMLPAFDTPTGIPFGSVNLMYGVDKHESKITSTAGGGTLSLEFGVLSRLTNDPVFEQVAKNAVRGLWARRSNLDLVGAHINVF TGEWTQKDAGIGTSIDSFYEYLLKAYILFGDEEYLYIFQEAYRSAMQYLHKDPWYVEVNMDSAAIVWPVFNSLQAFWPGLQVLAGDVDPAIRTHTAFFSV WKRYGFTPEGFNLATLSVQYGQKSYPLRPELIESTYWLYKATRDPRYLDAGRDFVASLQYGAKCPCGYCHITDVELHKQEDHMESFFLAETVKYLWLLFD LAVDSDNLVDNGPYKYIFSTEGHLLP |
Full Sequence |
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Protein Sequence Length: 625 Download |
MESNIRWLVF AILISLTFSS FVLDHGALAE SVKPDEAKQL RDEVRGMFYH AFDGYMNNAF 60 PLDELRPLSC QGEDTLGGYA LTLIDSLDTL ALLGDRERFT SSVEWIGKNL QFNINKTVSV 120 FETTIRVLGG LLSAHLIASD YATGMRIPSY NNELLVLAED LTRRMLPAFD TPTGIPFGSV 180 NLMYGVDKHE SKITSTAGGG TLSLEFGVLS RLTNDPVFEQ VAKNAVRGLW ARRSNLDLVG 240 AHINVFTGEW TQKDAGIGTS IDSFYEYLLK AYILFGDEEY LYIFQEAYRS AMQYLHKDPW 300 YVEVNMDSAA IVWPVFNSLQ AFWPGLQVLA GDVDPAIRTH TAFFSVWKRY GFTPEGFNLA 360 TLSVQYGQKS YPLRPELIES TYWLYKATRD PRYLDAGRDF VASLQYGAKC PCGYCHITDV 420 ELHKQEDHME SFFLAETVKY LWLLFDLAVD SDNLVDNGPY KYIFSTEGHL LPLTPQISLA 480 RERCSYFGGY CPSNSTKLEQ EVLEEESNND DRSNIYPYHE SFPITGLIKG LCPGLTHAQK 540 YGLSYVLPEK TDREDVDEAK PVVTSSSIVL ITDQRVGKKP QEEEGFTSQS EPIMTISGGS 600 SNDQTGQELT LLESETDDQR LYSS* 660 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PTZ00470 | PTZ00470 | 1.0e-75 | 35 | 476 | 485 | + glycoside hydrolase family 47 protein; Provisional | ||
pfam01532 | Glyco_hydro_47 | 1.0e-169 | 47 | 473 | 462 | + Glycosyl hydrolase family 47. Members of this family are alpha-mannosidases that catalyze the hydrolysis of the terminal 1,2-linked alpha-D-mannose residues in the oligo-mannose oligosaccharide Man(9)(GlcNAc)(2). |
Gene Ontology | |
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GO Term | Description |
GO:0004571 | mannosyl-oligosaccharide 1,2-alpha-mannosidase activity |
GO:0005509 | calcium ion binding |
GO:0016020 | membrane |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 4ayr_A | 0 | 28 | 445 | 1 | 413 | A Chain A, Polygalacturonase From Erwinia Carotovora Ssp. Carotovora |
PDB | 4ayq_A | 0 | 28 | 445 | 1 | 413 | A Chain A, Polygalacturonase From Erwinia Carotovora Ssp. Carotovora |
PDB | 4ayp_A | 0 | 28 | 445 | 1 | 413 | A Chain A, Polygalacturonase From Erwinia Carotovora Ssp. Carotovora |
PDB | 4ayo_A | 0 | 28 | 445 | 1 | 413 | A Chain A, Structure Of The Gh47 Processing Alpha-1,2-mannosidase From Caulobacter Strain K31 |
PDB | 1fmi_A | 0 | 47 | 473 | 17 | 456 | A Chain A, Crystal Structure Of Human Class I Alpha1,2-Mannosidase |