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Basic Information | |
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Species | Sorghum bicolor |
Cazyme ID | Sb01g045200.1 |
Family | GT33 |
Protein Properties | Length: 472 Molecular Weight: 52274.5 Isoelectric Point: 6.8345 |
Chromosome | Chromosome/Scaffold: 1 Start: 68355183 End: 68359825 |
Description | UDP-Glycosyltransferase superfamily protein |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GT33 | 9 | 464 | 0 |
KRAAVVVLGDIGRSPRMQYHSLSLANQASMEVDIVANGGSDPHLSLRENPSIHIHEMKTVQLTGISKISGALALLLKAVVQFILLVWFLCFKIPRPDVFV VQNPPSVPTLAAVKLASWLRGAKFIVDWHNFGYTLLGLSHGRSHIIVKIYFWFEKHFGRMADGAFCVTKAMQHELAQNWGIRATVLYDQSPDFFHPASLM EKHGLFSRLGNSICSAMGNADCISVEEVGEHMNTTAFTSNIDGEVFLKPNRPALVVSSTSWTPDEDFSILLEAALMYDRRVAAALGEDDSMDEEQLWIDI KNGKQFVYPRLLFIITGKGPDRKKYEDQIKRLKLRRVALRTMWLASEDYPLLLGSADLGVSLHTSSSGLDLPMKVVDMFGCGLPVCAASFSCIEELVKVN KNGLLFSTSSELADELMMLFKGFPEECNALKSLKEGAMKSASSSKWSTEWETNALP |
Full Sequence |
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Protein Sequence Length: 472 Download |
MAEATERRKR AAVVVLGDIG RSPRMQYHSL SLANQASMEV DIVANGGSDP HLSLRENPSI 60 HIHEMKTVQL TGISKISGAL ALLLKAVVQF ILLVWFLCFK IPRPDVFVVQ NPPSVPTLAA 120 VKLASWLRGA KFIVDWHNFG YTLLGLSHGR SHIIVKIYFW FEKHFGRMAD GAFCVTKAMQ 180 HELAQNWGIR ATVLYDQSPD FFHPASLMEK HGLFSRLGNS ICSAMGNADC ISVEEVGEHM 240 NTTAFTSNID GEVFLKPNRP ALVVSSTSWT PDEDFSILLE AALMYDRRVA AALGEDDSMD 300 EEQLWIDIKN GKQFVYPRLL FIITGKGPDR KKYEDQIKRL KLRRVALRTM WLASEDYPLL 360 LGSADLGVSL HTSSSGLDLP MKVVDMFGCG LPVCAASFSC IEELVKVNKN GLLFSTSSEL 420 ADELMMLFKG FPEECNALKS LKEGAMKSAS SSKWSTEWET NALPLVNQVI G* 480 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
cd01635 | Glycosyltransferase_GTB_type | 1.0e-9 | 316 | 414 | 100 | + Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. The structures of the formed glycoconjugates are extremely diverse, reflecting a wide range of biological functions. The members of this family share a common GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. | ||
COG0438 | RfaG | 3.0e-10 | 90 | 429 | 348 | + Glycosyltransferase [Cell envelope biogenesis, outer membrane] | ||
cd03794 | GT1_wbuB_like | 1.0e-15 | 20 | 438 | 440 | + This family is most closely related to the GT1 family of glycosyltransferases. wbuB in E. coli is involved in the biosynthesis of the O26 O-antigen. It has been proposed to function as an N-acetyl-L-fucosamine (L-FucNAc) transferase. | ||
PLN02275 | PLN02275 | 0 | 5 | 428 | 425 | + transferase, transferring glycosyl groups | ||
cd03816 | GT1_ALG1_like | 0 | 8 | 466 | 461 | + This family is most closely related to the GT1 family of glycosyltransferases. The yeast gene ALG1 has been shown to function as a mannosyltransferase that catalyzes the formation of dolichol pyrophosphate (Dol-PP)-GlcNAc2Man from GDP-Man and Dol-PP-Glc-NAc2, and participates in the formation of the lipid-linked precursor oligosaccharide for N-glycosylation. In humans ALG1 has been associated with the congenital disorders of glycosylation (CDG) designated as subtype CDG-Ik. |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | AAN65437.1 | 0 | 1 | 468 | 1 | 451 | Putative glycosyl transferase [Oryza sativa Japonica Group] |
GenBank | EEC80822.1 | 0 | 16 | 471 | 18 | 447 | hypothetical protein OsI_23401 [Oryza sativa Indica Group] |
RefSeq | NP_001049165.1 | 0 | 1 | 471 | 1 | 473 | Os03g0180700 [Oryza sativa (japonica cultivar-group)] |
RefSeq | NP_001149006.1 | 0 | 4 | 471 | 2 | 468 | beta-1,4-mannosyltransferase [Zea mays] |
RefSeq | XP_002465752.1 | 0 | 1 | 471 | 1 | 471 | hypothetical protein SORBIDRAFT_01g045200 [Sorghum bicolor] |
Metabolic Pathways | |||
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Pathway Name | Reaction | EC | Protein Name |
dolichyl-diphosphooligosaccharide biosynthesis | 2.4.1.142-RXN | EC-2.4.1.142 | chitobiosyldiphosphodolichol β-mannosyltransferase |