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Basic Information | |
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Species | Panicum virgatum |
Cazyme ID | Pavirv00038448m |
Family | GT33 |
Protein Properties | Length: 473 Molecular Weight: 52293.6 Isoelectric Point: 7.5417 |
Chromosome | Chromosome/Scaffold: 000595 Start: 6023 End: 10059 |
Description | UDP-Glycosyltransferase superfamily protein |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GT33 | 10 | 465 | 0 |
KRAAVVVLGDIGRSPRMQYHSLSLANQAGMEVDIVANGGSDPHLSLRENPSIHIHEMKTVKLTGISKISGALALLLKAAIQFVMLVWFLCFKIPRPDVLL VQNPPSVPTLAAVKLASWLRGAKFIVDWHNFGYTLLGLSHGRSHIIVKIYFWFEKHFGQMADGAFCVTKAMQHELAQNWGVRATVLYDQSPDFFHPASLM EKHGLFSRLGNTICSAMGNVDCISVEKEVQDMNTTVFTSKNDGKIFLKPNRPALVVSSTSWTPDEDFSILLEAALMYDRRVAATLGEDDSMDEGQLWIDI KNGKQFGYPRLLFIITGKGPDRKKYEDQIRRLKLRRVAFRTMWLASEDYPLLLGSADLGVSLHTSSSGLDLPMKVVDMFGCGLPVCAASFSCIEELVKVN KNGLLFSTSSELADELMMLFKGFPEECYALKSLKEGAMDTASTSKWSTEWETNALP |
Full Sequence |
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Protein Sequence Length: 473 Download |
MAGSAAGRWK RAAVVVLGDI GRSPRMQYHS LSLANQAGME VDIVANGGSD PHLSLRENPS 60 IHIHEMKTVK LTGISKISGA LALLLKAAIQ FVMLVWFLCF KIPRPDVLLV QNPPSVPTLA 120 AVKLASWLRG AKFIVDWHNF GYTLLGLSHG RSHIIVKIYF WFEKHFGQMA DGAFCVTKAM 180 QHELAQNWGV RATVLYDQSP DFFHPASLME KHGLFSRLGN TICSAMGNVD CISVEKEVQD 240 MNTTVFTSKN DGKIFLKPNR PALVVSSTSW TPDEDFSILL EAALMYDRRV AATLGEDDSM 300 DEGQLWIDIK NGKQFGYPRL LFIITGKGPD RKKYEDQIRR LKLRRVAFRT MWLASEDYPL 360 LLGSADLGVS LHTSSSGLDL PMKVVDMFGC GLPVCAASFS CIEELVKVNK NGLLFSTSSE 420 LADELMMLFK GFPEECYALK SLKEGAMDTA STSKWSTEWE TNALPLVNQV CG* 480 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
COG0438 | RfaG | 2.0e-10 | 91 | 430 | 348 | + Glycosyltransferase [Cell envelope biogenesis, outer membrane] | ||
TIGR00032 | argG | 2.0e-10 | 318 | 426 | 110 | + argininosuccinate synthase. argG in bacteria, ARG1 in Saccharomyces cerevisiae. There is a very unusual clustering in the alignment, with a deep split between one cohort of E. coli, H. influenzae, and Streptomyces, and the other cohort of eukaryotes, archaea, and the rest of the eubacteria [Amino acid biosynthesis, Glutamate family]. | ||
cd01635 | Glycosyltransferase_GTB_type | 2.0e-10 | 316 | 415 | 101 | + Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. The structures of the formed glycoconjugates are extremely diverse, reflecting a wide range of biological functions. The members of this family share a common GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. | ||
PLN02275 | PLN02275 | 0 | 6 | 429 | 425 | + transferase, transferring glycosyl groups | ||
cd03816 | GT1_ALG1_like | 0 | 10 | 467 | 460 | + This family is most closely related to the GT1 family of glycosyltransferases. The yeast gene ALG1 has been shown to function as a mannosyltransferase that catalyzes the formation of dolichol pyrophosphate (Dol-PP)-GlcNAc2Man from GDP-Man and Dol-PP-Glc-NAc2, and participates in the formation of the lipid-linked precursor oligosaccharide for N-glycosylation. In humans ALG1 has been associated with the congenital disorders of glycosylation (CDG) designated as subtype CDG-Ik. |
Gene Ontology | |
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GO Term | Description |
GO:0009058 | biosynthetic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | AAN65437.1 | 0 | 6 | 469 | 7 | 451 | Putative glycosyl transferase [Oryza sativa Japonica Group] |
GenBank | EEC80822.1 | 0 | 17 | 472 | 18 | 447 | hypothetical protein OsI_23401 [Oryza sativa Indica Group] |
RefSeq | NP_001049165.1 | 0 | 6 | 472 | 7 | 473 | Os03g0180700 [Oryza sativa (japonica cultivar-group)] |
RefSeq | NP_001149006.1 | 0 | 10 | 472 | 6 | 468 | beta-1,4-mannosyltransferase [Zea mays] |
RefSeq | XP_002465752.1 | 0 | 3 | 472 | 2 | 471 | hypothetical protein SORBIDRAFT_01g045200 [Sorghum bicolor] |
Metabolic Pathways | |||
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Pathway Name | Reaction | EC | Protein Name |
dolichyl-diphosphooligosaccharide biosynthesis | 2.4.1.142-RXN | EC-2.4.1.142 | chitobiosyldiphosphodolichol β-mannosyltransferase |