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Basic Information | |
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Species | Malus domestica |
Cazyme ID | MDP0000159170 |
Family | GT33 |
Protein Properties | Length: 1007 Molecular Weight: 113624 Isoelectric Point: 8.0495 |
Chromosome | Chromosome/Scaffold: 000810342 Start: 33164 End: 42584 |
Description | UDP-Glycosyltransferase superfamily protein |
View CDS |
External Links |
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NCBI Taxonomy |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GT33 | 19 | 459 | 0 |
RACVVVLGDIGRSPRMQYHALSLARQASLEVDIVAYGGTSFALMQQWPTFSRGLPSILKPFVLLIKAVTQFLMLLWFLCVKIPAPDVFLVQNPPSVPTLV AVKWASWFRKSAFIVDWHNFGYTLLALSLGRSSQFVAIYRCRLSFSCLIRFERHFGKMADGSLCVTRAMQHELAQNWGIKATVLYDQPPEFFQPASLEEK HKLFCRLDKILRQPLGVQDCTSTETGEENTDMNETLFTTFVGTDVTSKPNRPALIVSSTSWTPDEDFEILLEAAVMYDRRVAAILNEDDSTKEEVIWKEI HSGKQYLYPRLLFVITGKGPEKQKYEDKISRLHLKRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSCIKELVQVE KNGLLFSSSSELADELLVLRNGALEMASSGRWATEWEEHAK |
Full Sequence |
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Protein Sequence Length: 1007 Download |
MAKARGLRMV GDARRKRGRA CVVVLGDIGR SPRMQYHALS LARQASLEVD IVAYGGTSFA 60 LMQQWPTFSR GLPSILKPFV LLIKAVTQFL MLLWFLCVKI PAPDVFLVQN PPSVPTLVAV 120 KWASWFRKSA FIVDWHNFGY TLLALSLGRS SQFVAIYRCR LSFSCLIRFE RHFGKMADGS 180 LCVTRAMQHE LAQNWGIKAT VLYDQPPEFF QPASLEEKHK LFCRLDKILR QPLGVQDCTS 240 TETGEENTDM NETLFTTFVG TDVTSKPNRP ALIVSSTSWT PDEDFEILLE AAVMYDRRVA 300 AILNEDDSTK EEVIWKEIHS GKQYLYPRLL FVITGKGPEK QKYEDKISRL HLKRVAFRTM 360 WLSAEDYPLL LGSADLGVCL HTSSSGLDLP MKVVDMFGCG LPVCAVSYSC IKELVQVEKN 420 GLLFSSSSEL ADELLVLRNG ALEMASSGRW ATEWEEHAKA LILEVGHSYF SYLPVRPYIG 480 RPTNYFLLIF GPQFVEEIVR VLDCRNQGGG GLNVPVSIAE KASPAAAAAS MGKKRQRERH 540 QNPEPFLAEE NGSVASKKRT KSKQHQQEEK LISSGMSSKI LKQALAQQRE IEDEENRAQN 600 PNNSLLDVSE EPRKEEADGE EEDIDDFGGF SETQSRFDGY EEGDEHGEKL LNEIDEHDEK 660 ILEQFLSKDA GPQRTLADLI VARIKEKDSN VGSDARPLPK LDTSVIDLYK GVGKFLNKYT 720 AGKIPKAFKH IPSVPRWEDV LYLTEPENWS PNAMYQATRI FASNLGKEKV ERFYKLVLLP 780 RVREDIRKHK RLHFALYQSL KKSLYKPAAF FIGILFPLCE SGTCNLREAV IFGSIIQKVS 840 IPPLHSSVAL MKLAEMKYCG TTSYFIKLLL DKKYALPYRV LDALVAHFMR FMEETRVMPV 900 IWHQSLLTFV QRYKNELQKE DKDNLRNLLE TQKHYLVGAI SLEAFDFCNY VAIMSSVFGD 960 SIANLGSAAG CCRSWAKGGV YPLLSDLGVT CALRVEAILK RRSLPTG 1020 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
cd03794 | GT1_wbuB_like | 2.0e-12 | 29 | 462 | 465 | + This family is most closely related to the GT1 family of glycosyltransferases. wbuB in E. coli is involved in the biosynthesis of the O26 O-antigen. It has been proposed to function as an N-acetyl-L-fucosamine (L-FucNAc) transferase. | ||
cd03801 | GT1_YqgM_like | 1.0e-14 | 34 | 462 | 451 | + This family is most closely related to the GT1 family of glycosyltransferases and named after YqgM in Bacillus licheniformis about which little is known. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. The members of this family are found mainly in certain bacteria and archaea. | ||
pfam05291 | Bystin | 7.0e-155 | 665 | 938 | 281 | + Bystin. Trophinin and tastin form a cell adhesion molecule complex that potentially mediates an initial attachment of the blastocyst to uterine epithelial cells at the time of implantation. Trophinin and tastin bind to an intermediary cytoplasmic protein called bystin. Bystin may be involved in implantation and trophoblast invasion because bystin is found with trophinin and tastin in the cells at human implantation sites and also in the intermediate trophoblasts at invasion front in the placenta from early pregnancy. This family also includes the yeast protein ENP1. ENP1 is an essential protein in Saccharomyces cerevisiae and is localised in the nucleus. It is thought that ENP1 plays a direct role in the early steps of rRNA processing as enp1 defective yeast cannot synthesise 20S pre-rRNA and hence 18S rRNA, which leads to reduced formation of 40S ribosomal subunits. | ||
cd03816 | GT1_ALG1_like | 8.0e-179 | 15 | 462 | 472 | + This family is most closely related to the GT1 family of glycosyltransferases. The yeast gene ALG1 has been shown to function as a mannosyltransferase that catalyzes the formation of dolichol pyrophosphate (Dol-PP)-GlcNAc2Man from GDP-Man and Dol-PP-Glc-NAc2, and participates in the formation of the lipid-linked precursor oligosaccharide for N-glycosylation. In humans ALG1 has been associated with the congenital disorders of glycosylation (CDG) designated as subtype CDG-Ik. | ||
PLN02275 | PLN02275 | 0 | 16 | 437 | 434 | + transferase, transferring glycosyl groups |
Gene Ontology | |
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GO Term | Description |
GO:0009058 | biosynthetic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CBI19390.1 | 0 | 16 | 465 | 11 | 478 | unnamed protein product [Vitis vinifera] |
RefSeq | NP_173105.1 | 0 | 16 | 465 | 3 | 458 | glycosyl transferase family 1 protein [Arabidopsis thaliana] |
RefSeq | XP_002283369.1 | 0 | 16 | 462 | 126 | 590 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002330745.1 | 0 | 16 | 464 | 3 | 467 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002532170.1 | 0 | 10 | 465 | 1 | 470 | beta1,4 mannosyltransferase, putative [Ricinus communis] |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
DV132185 | 280 | 126 | 405 | 0 |
GO265461 | 301 | 637 | 937 | 0 |
FE967897 | 253 | 665 | 917 | 0 |
JG909886 | 293 | 148 | 440 | 0 |
EX354390 | 257 | 681 | 937 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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