y
Basic Information | |
---|---|
Species | Glycine max |
Cazyme ID | Glyma15g40830.1 |
Family | GT33 |
Protein Properties | Length: 484 Molecular Weight: 54094.8 Isoelectric Point: 7.2651 |
Chromosome | Chromosome/Scaffold: 15 Start: 47820024 End: 47826024 |
Description | UDP-Glycosyltransferase superfamily protein |
View CDS |
External Links |
---|
NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
---|---|---|---|
Family | Start | End | Evalue |
GT33 | 15 | 474 | 0 |
RACVVVLGDIGRSPRMQYHALSLANQASLEVDIVAYGGSEPHTALLANPSIHIYIMKQWLTASQSLPKILRPIMLLLKPLVQFCMLLWFLCVKIPSPDIF IVQNPPSVPTLVAVKWASWLRNSSFVIDWHNFGYTLLALSLGRNSHFVSLYKWFEKHYGKMADASLCVTKAMQHELAQNWGINATVLYDQPPDIFHPASL EERHKLFCRLNEDLFRSLGVRDCVSNGNSLVASCHQNETLFATEVGSNIYLKPNRPALVVSSTSWTPDEDFGILLEAAVMYDRRVAAILGEDDSVDEEVI WKEISDGKQCLYPRLLFIITGKGPEKEKYEVKIKRMKLKRVAFRTMWLSADDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSCIREL VRVDKNGLLFSSSSELADELLLLFKGFPDDCDALKVLKYGALETGSSSRWATEWEEHAKP |
Full Sequence |
---|
Protein Sequence Length: 484 Download |
MAGKSNEKKG GRRGRACVVV LGDIGRSPRM QYHALSLANQ ASLEVDIVAY GGSEPHTALL 60 ANPSIHIYIM KQWLTASQSL PKILRPIMLL LKPLVQFCML LWFLCVKIPS PDIFIVQNPP 120 SVPTLVAVKW ASWLRNSSFV IDWHNFGYTL LALSLGRNSH FVSLYKWFEK HYGKMADASL 180 CVTKAMQHEL AQNWGINATV LYDQPPDIFH PASLEERHKL FCRLNEDLFR SLGVRDCVSN 240 GNSLVASCHQ NETLFATEVG SNIYLKPNRP ALVVSSTSWT PDEDFGILLE AAVMYDRRVA 300 AILGEDDSVD EEVIWKEISD GKQCLYPRLL FIITGKGPEK EKYEVKIKRM KLKRVAFRTM 360 WLSADDYPLL LGSADLGVCL HTSSSGLDLP MKVVDMFGCG LPVCAVSYSC IRELVRVDKN 420 GLLFSSSSEL ADELLLLFKG FPDDCDALKV LKYGALETGS SSRWATEWEE HAKPLITEVI 480 SRF* 540 |
Functional Domains Download unfiltered results here | ||||||||
---|---|---|---|---|---|---|---|---|
Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
TIGR00032 | argG | 6.0e-7 | 327 | 421 | 96 | + argininosuccinate synthase. argG in bacteria, ARG1 in Saccharomyces cerevisiae. There is a very unusual clustering in the alignment, with a deep split between one cohort of E. coli, H. influenzae, and Streptomyces, and the other cohort of eukaryotes, archaea, and the rest of the eubacteria [Amino acid biosynthesis, Glutamate family]. | ||
cd01635 | Glycosyltransferase_GTB_type | 7.0e-8 | 326 | 421 | 97 | + Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. The structures of the formed glycoconjugates are extremely diverse, reflecting a wide range of biological functions. The members of this family share a common GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. | ||
COG0438 | RfaG | 4.0e-8 | 83 | 421 | 342 | + Glycosyltransferase [Cell envelope biogenesis, outer membrane] | ||
PLN02275 | PLN02275 | 0 | 11 | 421 | 411 | + transferase, transferring glycosyl groups | ||
cd03816 | GT1_ALG1_like | 0 | 13 | 476 | 466 | + This family is most closely related to the GT1 family of glycosyltransferases. The yeast gene ALG1 has been shown to function as a mannosyltransferase that catalyzes the formation of dolichol pyrophosphate (Dol-PP)-GlcNAc2Man from GDP-Man and Dol-PP-Glc-NAc2, and participates in the formation of the lipid-linked precursor oligosaccharide for N-glycosylation. In humans ALG1 has been associated with the congenital disorders of glycosylation (CDG) designated as subtype CDG-Ik. |
Gene Ontology | |
---|---|
GO Term | Description |
GO:0009058 | biosynthetic process |
Annotations - NR Download unfiltered results here | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CBI19390.1 | 0 | 1 | 481 | 1 | 480 | unnamed protein product [Vitis vinifera] |
RefSeq | XP_002283369.1 | 0 | 1 | 481 | 116 | 595 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002330745.1 | 0 | 11 | 478 | 2 | 467 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002465752.1 | 0 | 12 | 480 | 7 | 470 | hypothetical protein SORBIDRAFT_01g045200 [Sorghum bicolor] |
RefSeq | XP_002532170.1 | 0 | 8 | 482 | 3 | 473 | beta1,4 mannosyltransferase, putative [Ricinus communis] |
Metabolic Pathways | |||
---|---|---|---|
Pathway Name | Reaction | EC | Protein Name |
dolichyl-diphosphooligosaccharide biosynthesis | 2.4.1.142-RXN | EC-2.4.1.142 | chitobiosyldiphosphodolichol β-mannosyltransferase |
EST Download unfiltered results here | ||||
---|---|---|---|---|
Hit | Length | Start | End | EValue |
DW017293 | 255 | 1 | 254 | 0 |
FG904027 | 233 | 1 | 233 | 0 |
DV132185 | 272 | 134 | 405 | 0 |
GO872658 | 337 | 12 | 348 | 0 |
GO263659 | 144 | 241 | 384 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
---|