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Basic Information | |
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Species | Ricinus communis |
Cazyme ID | 27893.m000222 |
Family | GT33 |
Protein Properties | Length: 476 Molecular Weight: 53640.4 Isoelectric Point: 8.4641 |
Chromosome | Chromosome/Scaffold: 27893 Start: 17030 End: 22745 |
Description | UDP-Glycosyltransferase superfamily protein |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GT33 | 10 | 465 | 0 |
RACVVVLGDIGRSPRMQYHALSLALQASLQVDIVAYGGSEPHMALLQNQSIHIHKMKQWPVLPQSLPKLLKALVLVLKPLFQFFVLLWHLCFKVPAPDVF IVQNPPSVPTLVAVKWASWLRNSAFIVDWHNFGYTLLALSLGRNSRFVAVYRWFERHYGRMANGSLCVTKAMQHELAQNWGINATVLYDQPPEFFNPTSL EEKHKLFCRLDKYIIQPGSIHDCASYGMGNHNVNETMFTTSVDGDTILKPNRPALVVSSTSWTPDEDFGILLEAAVMYDRRVAAILNENDSSLDEVLWKE LTKGKQCLYPRLLFVITGKGPEKEKYEEKIRRLHLKRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVAYSCIKELVEV DKNGLLFSSSSELADELLMLFKSYPDECNALKLLRNGALEKSSSRWATEWEAHAKP |
Full Sequence |
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Protein Sequence Length: 476 Download |
MGKKRRGRGR ACVVVLGDIG RSPRMQYHAL SLALQASLQV DIVAYGGSEP HMALLQNQSI 60 HIHKMKQWPV LPQSLPKLLK ALVLVLKPLF QFFVLLWHLC FKVPAPDVFI VQNPPSVPTL 120 VAVKWASWLR NSAFIVDWHN FGYTLLALSL GRNSRFVAVY RWFERHYGRM ANGSLCVTKA 180 MQHELAQNWG INATVLYDQP PEFFNPTSLE EKHKLFCRLD KYIIQPGSIH DCASYGMGNH 240 NVNETMFTTS VDGDTILKPN RPALVVSSTS WTPDEDFGIL LEAAVMYDRR VAAILNENDS 300 SLDEVLWKEL TKGKQCLYPR LLFVITGKGP EKEKYEEKIR RLHLKRVAFR TMWLSAEDYP 360 LLLGSADLGV CLHTSSSGLD LPMKVVDMFG CGLPVCAVAY SCIKELVEVD KNGLLFSSSS 420 ELADELLMLF KSYPDECNAL KLLRNGALEK SSSRWATEWE AHAKPLITEV ISKTSN 480 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
cd01635 | Glycosyltransferase_GTB_type | 2.0e-6 | 318 | 416 | 100 | + Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. The structures of the formed glycoconjugates are extremely diverse, reflecting a wide range of biological functions. The members of this family share a common GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. | ||
pfam13692 | Glyco_trans_1_4 | 8.0e-7 | 356 | 431 | 76 | + Glycosyl transferases group 1. | ||
cd03794 | GT1_wbuB_like | 7.0e-10 | 90 | 446 | 367 | + This family is most closely related to the GT1 family of glycosyltransferases. wbuB in E. coli is involved in the biosynthesis of the O26 O-antigen. It has been proposed to function as an N-acetyl-L-fucosamine (L-FucNAc) transferase. | ||
PLN02275 | PLN02275 | 0 | 1 | 430 | 430 | + transferase, transferring glycosyl groups | ||
cd03816 | GT1_ALG1_like | 0 | 6 | 467 | 464 | + This family is most closely related to the GT1 family of glycosyltransferases. The yeast gene ALG1 has been shown to function as a mannosyltransferase that catalyzes the formation of dolichol pyrophosphate (Dol-PP)-GlcNAc2Man from GDP-Man and Dol-PP-Glc-NAc2, and participates in the formation of the lipid-linked precursor oligosaccharide for N-glycosylation. In humans ALG1 has been associated with the congenital disorders of glycosylation (CDG) designated as subtype CDG-Ik. |
Gene Ontology | |
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GO Term | Description |
GO:0009058 | biosynthetic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CBI19390.1 | 0 | 8 | 473 | 12 | 481 | unnamed protein product [Vitis vinifera] |
RefSeq | XP_002283369.1 | 0 | 8 | 472 | 127 | 595 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002330745.1 | 0 | 1 | 469 | 1 | 467 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002465752.1 | 0 | 1 | 471 | 1 | 470 | hypothetical protein SORBIDRAFT_01g045200 [Sorghum bicolor] |
RefSeq | XP_002532170.1 | 0 | 1 | 476 | 1 | 476 | beta1,4 mannosyltransferase, putative [Ricinus communis] |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
DV132185 | 269 | 129 | 397 | 0 |
DR940879 | 261 | 40 | 297 | 0 |
GO921748 | 266 | 215 | 476 | 0 |
JG909886 | 283 | 151 | 433 | 0 |
GH271554 | 245 | 204 | 448 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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