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Basic Information | |
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Species | Populus trichocarpa |
Cazyme ID | Potri.001G012200.3 |
Family | GT48 |
Protein Properties | Length: 1919 Molecular Weight: 220917 Isoelectric Point: 9.2364 |
Chromosome | Chromosome/Scaffold: 01 Start: 806377 End: 821895 |
Description | glucan synthase-like 12 |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GT48 | 1053 | 1807 | 0 |
VPSNLEARRRISFFSNSLFMDMPTAPKVRNMLSFSVLTPYYTEDVLFSLLDLEVPNEDGVSILFYLQKIFPDEWNNFLERVDCSSEEELKGRDNLDEELR LWASYRGQTLTRTVRGMMYYRHALELQAFLDMAGDEDLMEGYKAIELSTDDQSKGGRSLLAQCQAVADMKFTYVVSCQKYGIHKRSGDPRAQDILRLMTT YPSLRVAYIDEVEETNPDRSKVIQKVYYSSLVKAALPKSIDSSEPVQNLDQVIYRIKLPGPAILGEGKPENQNHAIIFTRGEGLQTIDMNQDNYMEEALK MRNLLQEFLKKPDGVRNPSILGLREHIFTGSVSSLAWFMSNQETSFVTIGQRLLANPLKVRFHYGHPDVFDRLFHLTRGGVSKASKVINLSEDIFAGFNS TLREGNVTHHEYIQVGKGRDVGLNQISMFEAKIANGNGEQTLSRDIYRLGHRFDFFRMLSCYFTTVGFYFSTLITVLTVYVFLYGRLYLVLSGLEEGLST QKAIRDNKPLQVALASQSFVQIGFLMALPMLMEIGLERGFRTALSEFILMQLQLAPVFFTFSLGTKTHYYGRTLLHGGAKYRPTGRGFVVFHAKFADNYR LYSRSHFVKGIEMMILLVVYQIFGQPYRSAVAYLLITISMWFMVGTWLFAPFLFNPSGFEWQKIVDDWTDWNKWISNRGGIGVPSEKSWESWWEEEQEHL RHSGKRGILAEILLSLRFFIYQYGLVYHLTITKKTKSFLVYGVSWLVIFLILFVM |
Full Sequence |
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Protein Sequence Length: 1919 Download |
MDQAAGGPLA TPPQTQRRLT RTQTAGNLGE SIFDSEVVPS SLVEIAPILR VANEVESSNP 60 RVAYLCRFYA FEKAHRLDPT SSGRGVRQFK TALLQRLERE NDPTLMGRVK KSDAREMQSF 120 YQHYYKKYIQ ALHNAADKAD RAQLTKAYQT ANVLFEVLKA VNTTQSIEVD REILEAQDKV 180 AEKTQIYLPY NILPLDPDSA NQAIMRYPEI QAAVVALRNT RGLPWPKDYK KKNDEDVLDW 240 LQAMFGFQKD NVANQREHLI LLLANVHIRQ FPKPDQQPKL DERALTEVMK KLFKNYKKWC 300 KYLDRKSSLW LPTIQQEVQQ RKLLYMGLYL LIWGEAANLR FMPECICYIY HHMAFELYGM 360 LAGNVSPMTG ENVKPAYGGE EEAFLSKVVT PIYNMIAKEA ERSKKGKSKH SQWRNYDDLN 420 EYFWSVDCFR LGWPMRADAD FFCLSDHHHF EKNGDNKPAY RDRWVGKVNF VEIRSFLHVF 480 RSFDRMWSFF ILCLQAMITV AWHGSGQPSV IFSGDVFKKV LSVFITAAIL KLGQAILDVI 540 LNWKARQIMS FHVKLRFILK VVSAAAWVVV LPVTYAYTWD DKPPGFAQTI KGWFGNGFSS 600 PSLFILAVVI YLAPNMLAAV LFLFPFIRRF LERSNYRIVM LMMWWSQPRL YVGRGMHEST 660 ISLFKYTMFW VLLIITKLTF SYYIEIRPLV VPTKAIMSVH ITTFQWHEFF PRAKNNIGVV 720 IALWAPIILV YFMDSQIWYA IFSTFFGGIY GAFRRLGEIR TLGMLRSRFQ SLPGAFNACL 780 IPGDKSEPKK KGFKATLSRK FAEIPSNKEK EAARFAQLWN KIISSFREED LISNKEMDLL 840 LVPYWADRDL DLIQWPPFLL ASKIPIALDM AKDSNGKDKE LKKRIEFDNY MSCAVRECYA 900 SFKNIILFLV QGKREKEVID FIFSEVNIHI DGGDLISEYK MSALPFLYDH FVKLIKYLLA 960 NKPEDRDQVV ILFQDMLEVV TRDIMMEDHI SNLVDSIHGG SGHEGMTLHE RQYQLFASSG 1020 AIKFPIEPVT EAWKEKIKRL FLLLTTKESA MDVPSNLEAR RRISFFSNSL FMDMPTAPKV 1080 RNMLSFSVLT PYYTEDVLFS LLDLEVPNED GVSILFYLQK IFPDEWNNFL ERVDCSSEEE 1140 LKGRDNLDEE LRLWASYRGQ TLTRTVRGMM YYRHALELQA FLDMAGDEDL MEGYKAIELS 1200 TDDQSKGGRS LLAQCQAVAD MKFTYVVSCQ KYGIHKRSGD PRAQDILRLM TTYPSLRVAY 1260 IDEVEETNPD RSKVIQKVYY SSLVKAALPK SIDSSEPVQN LDQVIYRIKL PGPAILGEGK 1320 PENQNHAIIF TRGEGLQTID MNQDNYMEEA LKMRNLLQEF LKKPDGVRNP SILGLREHIF 1380 TGSVSSLAWF MSNQETSFVT IGQRLLANPL KVRFHYGHPD VFDRLFHLTR GGVSKASKVI 1440 NLSEDIFAGF NSTLREGNVT HHEYIQVGKG RDVGLNQISM FEAKIANGNG EQTLSRDIYR 1500 LGHRFDFFRM LSCYFTTVGF YFSTLITVLT VYVFLYGRLY LVLSGLEEGL STQKAIRDNK 1560 PLQVALASQS FVQIGFLMAL PMLMEIGLER GFRTALSEFI LMQLQLAPVF FTFSLGTKTH 1620 YYGRTLLHGG AKYRPTGRGF VVFHAKFADN YRLYSRSHFV KGIEMMILLV VYQIFGQPYR 1680 SAVAYLLITI SMWFMVGTWL FAPFLFNPSG FEWQKIVDDW TDWNKWISNR GGIGVPSEKS 1740 WESWWEEEQE HLRHSGKRGI LAEILLSLRF FIYQYGLVYH LTITKKTKSF LVYGVSWLVI 1800 FLILFVMKTV SVGRRKFSAN FQLAFRLIKG MIFLTFISIL VTLIALPHMT VQDIFVCILA 1860 FMPTGWGMLL VNCTSMQANR STSRVLGISS DTCSWLRNRY GLAPVHSSCI PCLVSICV* 1920 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam04652 | DUF605 | 7.0e-11 | 45 | 159 | 124 | + Vta1 like. Vta1 (VPS20-associated protein 1) is a positive regulator of Vps4. Vps4 is an ATPase that is required in the multivesicular body (MVB) sorting pathway to dissociate the endosomal sorting complex required for transport (ESCRT). Vta1 promotes correct assembly of Vps4 and stimulates its ATPase activity through its conserved Vta1/SBP1/LIP5 region. | ||
pfam14288 | FKS1_dom1 | 2.0e-57 | 320 | 436 | 118 | + 1,3-beta-glucan synthase subunit FKS1, domain-1. The FKS1_dom1 domain is likely to be the 'Class I' region just N-terminal to the first set of transmembrane helices that is involved in 1,3-beta-glucan synthesis itself. This family is found on proteins with family Glucan_synthase, pfam02364. | ||
pfam02364 | Glucan_synthase | 0 | 1053 | 1804 | 821 | + 1,3-beta-glucan synthase component. This family consists of various 1,3-beta-glucan synthase components including Gls1, Gls2 and Gls3 from yeast. 1,3-beta-glucan synthase EC:2.4.1.34 also known as callose synthase catalyzes the formation of a beta-1,3-glucan polymer that is a major component of the fungal cell wall. The reaction catalyzed is:- UDP-glucose + {(1,3)-beta-D-glucosyl}(N) <=> UDP + {(1,3)-beta-D-glucosyl}(N+1). |
Gene Ontology | |
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GO Term | Description |
GO:0000148 | 1,3-beta-D-glucan synthase complex |
GO:0003843 | 1,3-beta-D-glucan synthase activity |
GO:0006075 | (1->3)-beta-D-glucan biosynthetic process |
GO:0016020 | membrane |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CBI16456.1 | 0 | 1 | 1853 | 1 | 1849 | unnamed protein product [Vitis vinifera] |
RefSeq | XP_002283298.1 | 0 | 1 | 1853 | 1 | 1848 | PREDICTED: similar to Callose synthase 3 [Vitis vinifera] |
RefSeq | XP_002299147.1 | 0 | 1 | 1871 | 3 | 1859 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002304888.1 | 0 | 1 | 1871 | 3 | 1880 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002528124.1 | 0 | 7 | 1871 | 8 | 1874 | transferase, transferring glycosyl groups, putative [Ricinus communis] |
Metabolic Pathways | |||
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Pathway Name | Reaction | EC | Protein Name |
callose biosynthesis | 13-BETA-GLUCAN-SYNTHASE-RXN | EC-2.4.1.34 | 1,3-β-glucan synthase |