y
Basic Information | |
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Species | Brachypodium distachyon |
Cazyme ID | Bradi3g60790.2 |
Family | GT48 |
Protein Properties | Length: 1956 Molecular Weight: 224932 Isoelectric Point: 9.6468 |
Chromosome | Chromosome/Scaffold: 3 Start: 59608824 End: 59622548 |
Description | glucan synthase-like 12 |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GT48 | 1065 | 1810 | 0 |
VPTNLDARRRISFFANSLFMEMPRAPKVRHMLPFSVLTPYYKEGVLFSSQALEDQNEDGVSVLFYLQKIYPDEWKNFLERVECKTEEELRETEQSGDELR LWASYRGQTLTRTVRGMMYYRQALVLQSFLDMAREEDLMEGFRAADILSDESPLLTQCKAIADMKFTYVVSCQQYGIQKRSGDQRAQDILRLMTTYPSLR VAYIDEVEETSTERSKKIEKVYYSALVKAAVTKPDDPGQKLDQDIYRIKLPGNAMLGEGKPENQNHAIIFTRGEGLQTIDMNQEHYMEETLKMRNLLQEF TKKHDGVRYPSILGVREHIFTGSVSSLAWFMSNQETSFVTIGQRVLANPLRVRFHYGHPDIFDRLFHLTRGGVSKASKIINLSEDIFAGFNSTLREGNVT HHEYMQVGKGRDVGLNQISLFEAKIAYGNGEQTLSRDVYRLGHRFDFFRMLSCYYTTIGFYFSTMITVWTVYVFLYGRLYLVLSGLDKGLTTGKRFRHND PLQVALASQSFVQLGFLMALPMMMEIGLERGFRTALSDFILMQLQLASVFFTFSLGTKTHYYGKTLLHGGAEYRATGRGFVVFHAKFAENYRLYSRSHFV KGIELMILLIVYEIFGQSYRGAIAYIFITFSMWFMVVTWLFAPFLFNPSGFEWQKIVDDWTDWNKWISNRGGIGVSTEKSWESWWEKEHEPLKYSGKRGT VLEIVLAARFFIYQYGLVYHLNIIHTKSVLVYCLSWVVIFLILAVM |
Full Sequence |
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Protein Sequence Length: 1956 Download |
MASSSGRRMG PGGEGPPSSA SPASGGPAGR RILRTQTAGN LGESSFDSEV VPSSLVEIAP 60 ILRVANEVEA SNPRVAYLCR FYAFEKAHRL DPTSSGRGVR QFKTALLQRL ERENDPTLKG 120 RVKQSDAREM QSFYQHYYKK YIQALQNAAD KADRAQLTKA YQTAAVLFEV LKAVNVSQKI 180 EVDQAILETH NQVEEKKKLY LPYNILPLDP DSANQAIMQY PEIQAAFHAL RNTRGLPWPK 240 EHEKKSDADL LDWLQAMFGF QTDSVSNQRE HLILLLANMH IRQISKPDQQ SKLDDGALDK 300 VMKKLFKNYK RWCKYLGRKS SLRLPTIQQE VQQRKLLYMG LYLLIWGEAA NLRFMPECLC 360 YIYHHMAFEL YGMLAGNVSP TTGENVKPAY GGAVEAFLKK VVTPIYKIIE MEAERSKTIK 420 SKHSHWRNYD DLNEYFWSRD CFRLGWPMRA DADFFKTPNF SLAPRDQMNE ENRPAGSDHW 480 MGKVNFVEIR SFWHIFRSFD RMWSFLIISL QAMVIIAWNG GTPSDIFDAG VLKQVLSIFI 540 TAAVLKLGQA ILDIVLSWKA RKGMPLVVKL RYILKLLSAA AWVVVLPVTY AYTLENPTGL 600 ARTIKSWLGD GRKQPSLYIL AVAVYLAPNM LAATMFLFPV LRRALERSNL KVITFMMWWS 660 QPRLFVGRGM HEGAFSLFKY TMFWVLLLAT KLIVSFYVEI KPLVQPTKDI MKQPITTFEW 720 HEFFPHAKNN IGVVIALWAP IILVYFMDTQ IWYAIFSTLV GGIYGACRRL GEIRTLGMLR 780 SRFESLPKAF NDRLIPNDSN KRRGLRSAFS SKSSQKPEDD KEKEKIAAKF AQIWNLIITS 840 FRAEDLIDNR EKDLLLVPYC KDREMDIIQW PPFLLASKIP IALDMAADSG GKDRDLKKRM 900 KSDPYFTYAI KECYASFKNI INTLVVGRER LFIEKIFKVV DDHIEQDILI KELHMSNLPT 960 LSKKFIELLD ILQKNNKEDQ GQVIILFQDM LEVVTRDIMD DQLSGLLETV HGGNSRRHEG 1020 ITPLDQQDQL FTKAIEFPVK ESHAWTEKIK RLYLLLTVKE SAMDVPTNLD ARRRISFFAN 1080 SLFMEMPRAP KVRHMLPFSV LTPYYKEGVL FSSQALEDQN EDGVSVLFYL QKIYPDEWKN 1140 FLERVECKTE EELRETEQSG DELRLWASYR GQTLTRTVRG MMYYRQALVL QSFLDMAREE 1200 DLMEGFRAAD ILSDESPLLT QCKAIADMKF TYVVSCQQYG IQKRSGDQRA QDILRLMTTY 1260 PSLRVAYIDE VEETSTERSK KIEKVYYSAL VKAAVTKPDD PGQKLDQDIY RIKLPGNAML 1320 GEGKPENQNH AIIFTRGEGL QTIDMNQEHY MEETLKMRNL LQEFTKKHDG VRYPSILGVR 1380 EHIFTGSVSS LAWFMSNQET SFVTIGQRVL ANPLRVRFHY GHPDIFDRLF HLTRGGVSKA 1440 SKIINLSEDI FAGFNSTLRE GNVTHHEYMQ VGKGRDVGLN QISLFEAKIA YGNGEQTLSR 1500 DVYRLGHRFD FFRMLSCYYT TIGFYFSTMI TVWTVYVFLY GRLYLVLSGL DKGLTTGKRF 1560 RHNDPLQVAL ASQSFVQLGF LMALPMMMEI GLERGFRTAL SDFILMQLQL ASVFFTFSLG 1620 TKTHYYGKTL LHGGAEYRAT GRGFVVFHAK FAENYRLYSR SHFVKGIELM ILLIVYEIFG 1680 QSYRGAIAYI FITFSMWFMV VTWLFAPFLF NPSGFEWQKI VDDWTDWNKW ISNRGGIGVS 1740 TEKSWESWWE KEHEPLKYSG KRGTVLEIVL AARFFIYQYG LVYHLNIIHT KSVLVYCLSW 1800 VVIFLILAVM KAVSVGRRKF SAEFQLVFRL IKGLIFITFI SIIIILIAIP HMTVQDIFVC 1860 ILAFMPTGWG LLLVAQALKP AIVKLQLWGS IRALARGYEI IMGLLLFTPI AFLAWFPFVS 1920 EFQTRMLFNQ AFSRGLQISR ILGGHKKDRA ARNKE* 1980 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam04652 | DUF605 | 5.0e-11 | 58 | 172 | 120 | + Vta1 like. Vta1 (VPS20-associated protein 1) is a positive regulator of Vps4. Vps4 is an ATPase that is required in the multivesicular body (MVB) sorting pathway to dissociate the endosomal sorting complex required for transport (ESCRT). Vta1 promotes correct assembly of Vps4 and stimulates its ATPase activity through its conserved Vta1/SBP1/LIP5 region. | ||
pfam14288 | FKS1_dom1 | 1.0e-54 | 333 | 449 | 118 | + 1,3-beta-glucan synthase subunit FKS1, domain-1. The FKS1_dom1 domain is likely to be the 'Class I' region just N-terminal to the first set of transmembrane helices that is involved in 1,3-beta-glucan synthesis itself. This family is found on proteins with family Glucan_synthase, pfam02364. | ||
pfam02364 | Glucan_synthase | 0 | 1065 | 1808 | 818 | + 1,3-beta-glucan synthase component. This family consists of various 1,3-beta-glucan synthase components including Gls1, Gls2 and Gls3 from yeast. 1,3-beta-glucan synthase EC:2.4.1.34 also known as callose synthase catalyzes the formation of a beta-1,3-glucan polymer that is a major component of the fungal cell wall. The reaction catalyzed is:- UDP-glucose + {(1,3)-beta-D-glucosyl}(N) <=> UDP + {(1,3)-beta-D-glucosyl}(N+1). |
Gene Ontology | |
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GO Term | Description |
GO:0000148 | 1,3-beta-D-glucan synthase complex |
GO:0003843 | 1,3-beta-D-glucan synthase activity |
GO:0006075 | (1->3)-beta-D-glucan biosynthetic process |
GO:0016020 | membrane |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
DDBJ | BAD23015.1 | 0 | 30 | 1955 | 35 | 1969 | putative callose synthase 1 catalytic subunit [Oryza sativa Japonica Group] |
DDBJ | BAD62105.1 | 0 | 30 | 1955 | 28 | 1959 | putative callose synthase 1 catalytic subunit [Oryza sativa Japonica Group] |
GenBank | EEE58116.1 | 0 | 30 | 1955 | 35 | 1918 | hypothetical protein OsJ_09005 [Oryza sativa Japonica Group] |
RefSeq | XP_002439067.1 | 0 | 28 | 1955 | 28 | 1965 | hypothetical protein SORBIDRAFT_10g030970 [Sorghum bicolor] |
RefSeq | XP_002453103.1 | 0 | 7 | 1955 | 11 | 1942 | hypothetical protein SORBIDRAFT_04g038510 [Sorghum bicolor] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 2lxm_A | 0.002 | 62 | 171 | 21 | 128 | B Chain B, Lip5-chmp5 |
PDB | 2lxl_A | 0.003 | 62 | 171 | 21 | 128 | A Chain A, Lip5(mit)2 |
Metabolic Pathways | |||
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Pathway Name | Reaction | EC | Protein Name |
callose biosynthesis | 13-BETA-GLUCAN-SYNTHASE-RXN | EC-2.4.1.34 | 1,3-β-glucan synthase |