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Basic Information | |
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Species | Panicum virgatum |
Cazyme ID | Pavirv00048524m |
Family | GT48 |
Protein Properties | Length: 368 Molecular Weight: 42539.7 Isoelectric Point: 5.5601 |
Chromosome | Chromosome/Scaffold: 016496 Start: 4582 End: 7839 |
Description | glucan synthase-like 12 |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GT48 | 17 | 366 | 0 |
VPTNLDARRRISFFANSLFMSMPSAPKVRQMLPFSVLTPYYTEDVLFSSQALEEQNEDGVSILFYLQKIYPDEWKNFLERVDCKTEEELRETEQSEEELR LWASYRGQTLTRTVRGMMYYRQALVLQAFLDMARDEDLMEGFRAADLLSDESQLLLQCKAITDMKFTYVVSCQQYGIQKRSGDARAQDILRLMTTYPSLR VAYIDEVEEPSKDRNKKIEKVYYSALVKAAVTKPDDPGQKLDQDIYRIKLPGNAMLGEGKPENQNHAIIFTRGEGLQTIDMNQEHYMEETLKMRNLLQEF LKKHDGVRYPSILGVREHIFTGSVSSLAWFMSNQETSFVTIGQRVLANPL |
Full Sequence |
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Protein Sequence Length: 368 Download |
IKRLHLLLTV KESAMDVPTN LDARRRISFF ANSLFMSMPS APKVRQMLPF SVLTPYYTED 60 VLFSSQALEE QNEDGVSILF YLQKIYPDEW KNFLERVDCK TEEELRETEQ SEEELRLWAS 120 YRGQTLTRTV RGMMYYRQAL VLQAFLDMAR DEDLMEGFRA ADLLSDESQL LLQCKAITDM 180 KFTYVVSCQQ YGIQKRSGDA RAQDILRLMT TYPSLRVAYI DEVEEPSKDR NKKIEKVYYS 240 ALVKAAVTKP DDPGQKLDQD IYRIKLPGNA MLGEGKPENQ NHAIIFTRGE GLQTIDMNQE 300 HYMEETLKMR NLLQEFLKKH DGVRYPSILG VREHIFTGSV SSLAWFMSNQ ETSFVTIGQR 360 VLANPLR* 420 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam02364 | Glucan_synthase | 5.0e-99 | 17 | 366 | 395 | + 1,3-beta-glucan synthase component. This family consists of various 1,3-beta-glucan synthase components including Gls1, Gls2 and Gls3 from yeast. 1,3-beta-glucan synthase EC:2.4.1.34 also known as callose synthase catalyzes the formation of a beta-1,3-glucan polymer that is a major component of the fungal cell wall. The reaction catalyzed is:- UDP-glucose + {(1,3)-beta-D-glucosyl}(N) <=> UDP + {(1,3)-beta-D-glucosyl}(N+1). |
Gene Ontology | |
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GO Term | Description |
GO:0000148 | 1,3-beta-D-glucan synthase complex |
GO:0003843 | 1,3-beta-D-glucan synthase activity |
GO:0006075 | (1->3)-beta-D-glucan biosynthetic process |
GO:0016020 | membrane |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ACS36248.1 | 0 | 1 | 367 | 716 | 1088 | glucan synthase-like 2 [Hordeum vulgare] |
DDBJ | BAD23015.1 | 0 | 1 | 367 | 1062 | 1428 | putative callose synthase 1 catalytic subunit [Oryza sativa Japonica Group] |
GenBank | EEE58116.1 | 0 | 1 | 367 | 1011 | 1377 | hypothetical protein OsJ_09005 [Oryza sativa Japonica Group] |
RefSeq | NP_001048628.1 | 0 | 1 | 367 | 1 | 367 | Os02g0832500 [Oryza sativa (japonica cultivar-group)] |
RefSeq | XP_002453103.1 | 0 | 1 | 367 | 1033 | 1401 | hypothetical protein SORBIDRAFT_04g038510 [Sorghum bicolor] |
Metabolic Pathways | |||
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Pathway Name | Reaction | EC | Protein Name |
callose biosynthesis | 13-BETA-GLUCAN-SYNTHASE-RXN | EC-2.4.1.34 | 1,3-β-glucan synthase |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
FL715978 | 237 | 119 | 355 | 0 |
DY906377 | 302 | 3 | 298 | 0 |
GR281140 | 225 | 136 | 360 | 0 |
FL696468 | 194 | 174 | 367 | 0 |
DW126968 | 254 | 118 | 365 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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