y
Basic Information | |
---|---|
Species | Panicum virgatum |
Cazyme ID | Pavirv00007196m |
Family | GT48 |
Protein Properties | Length: 699 Molecular Weight: 80197.6 Isoelectric Point: 9.7742 |
Chromosome | Chromosome/Scaffold: 042466 Start: 1051 End: 5257 |
Description | glucan synthase-like 12 |
View CDS |
External Links |
---|
CAZyDB |
Signature Domain Download full data set without filtering | |||
---|---|---|---|
Family | Start | End | Evalue |
GT48 | 2 | 554 | 0 |
YPSLRVAYIDEVEEPSQDRNKKIEKVYYSALVKAAVTKPDDPGQKLDQDIYRIKLPGNAMLGEGKPENQNHAIIFTRGEGLQTIDMNQEHYMEETLKMRN LLQEFLKKHDGVRYPSILGVREHIFTGSVSSLAWFMSNQETSFVTIGQRVLANPLRVRFHYGHPDIFDRLFHLTRGGVSKASKIINLSEDIFAGFNSTLR EGNVTHHEYMQVGKGRDVGLNQISLFEAKIANGNGEQTLSRDVYRLGHRFDFFRMLSCYYTTIGFYFSTMITVWTVYVFLYGRLYLVLSGLDEALATGKR FIHNEPLQVALASQSFVQLGFLMALPMMMEIGLERGFRTALSDFVLMQLQLASVFFTFSLGTKTHYYGTTLLHGGAEYRPTGRGFVVFHAKFAENYRLYS RSHFVKGIELMILLIVYEIFGQSYRGAIAYIFITFSMWFMVVTWLFAPFLFNPSGFEWQKIVDDWTDWNKWISNRGGIGVPPEKSWESWWEKEQEPLRLS GKRGIVLEIVLALRFFIYQYGLVYHLNITKHTKSVLVYCLSWVVIFVILLVMK |
Full Sequence |
---|
Protein Sequence Length: 699 Download |
SYPSLRVAYI DEVEEPSQDR NKKIEKVYYS ALVKAAVTKP DDPGQKLDQD IYRIKLPGNA 60 MLGEGKPENQ NHAIIFTRGE GLQTIDMNQE HYMEETLKMR NLLQEFLKKH DGVRYPSILG 120 VREHIFTGSV SSLAWFMSNQ ETSFVTIGQR VLANPLRVRF HYGHPDIFDR LFHLTRGGVS 180 KASKIINLSE DIFAGFNSTL REGNVTHHEY MQVGKGRDVG LNQISLFEAK IANGNGEQTL 240 SRDVYRLGHR FDFFRMLSCY YTTIGFYFST MITVWTVYVF LYGRLYLVLS GLDEALATGK 300 RFIHNEPLQV ALASQSFVQL GFLMALPMMM EIGLERGFRT ALSDFVLMQL QLASVFFTFS 360 LGTKTHYYGT TLLHGGAEYR PTGRGFVVFH AKFAENYRLY SRSHFVKGIE LMILLIVYEI 420 FGQSYRGAIA YIFITFSMWF MVVTWLFAPF LFNPSGFEWQ KIVDDWTDWN KWISNRGGIG 480 VPPEKSWESW WEKEQEPLRL SGKRGIVLEI VLALRFFIYQ YGLVYHLNIT KHTKSVLVYC 540 LSWVVIFVIL LVMKTVSVGR RRFSAEFQLV FRLIKGLIFI TFISIIIILI AIPHMTVQDI 600 FVCILAFMPT GWGLLLIAQA IKPAIASVGL WGSIKALARG YEIIMGLLLF TPIAFLAWFP 660 FVSEFQTRML FNQAFSRGLQ ISRILGGHKK DRATRNKE* 720 |
Functional Domains Download unfiltered results here | ||||||||
---|---|---|---|---|---|---|---|---|
Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam02364 | Glucan_synthase | 1.0e-173 | 2 | 550 | 599 | + 1,3-beta-glucan synthase component. This family consists of various 1,3-beta-glucan synthase components including Gls1, Gls2 and Gls3 from yeast. 1,3-beta-glucan synthase EC:2.4.1.34 also known as callose synthase catalyzes the formation of a beta-1,3-glucan polymer that is a major component of the fungal cell wall. The reaction catalyzed is:- UDP-glucose + {(1,3)-beta-D-glucosyl}(N) <=> UDP + {(1,3)-beta-D-glucosyl}(N+1). |
Gene Ontology | |
---|---|
GO Term | Description |
GO:0000148 | 1,3-beta-D-glucan synthase complex |
GO:0003843 | 1,3-beta-D-glucan synthase activity |
GO:0006075 | (1->3)-beta-D-glucan biosynthetic process |
GO:0016020 | membrane |
Annotations - NR Download unfiltered results here | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
DDBJ | BAD23015.1 | 0 | 1 | 698 | 1272 | 1969 | putative callose synthase 1 catalytic subunit [Oryza sativa Japonica Group] |
GenBank | EEE58116.1 | 0 | 1 | 698 | 1221 | 1918 | hypothetical protein OsJ_09005 [Oryza sativa Japonica Group] |
RefSeq | NP_001048628.1 | 0 | 1 | 698 | 211 | 908 | Os02g0832500 [Oryza sativa (japonica cultivar-group)] |
RefSeq | NP_001058646.1 | 0 | 2 | 698 | 1176 | 1872 | Os06g0728800 [Oryza sativa (japonica cultivar-group)] |
RefSeq | XP_002453103.1 | 0 | 1 | 698 | 1245 | 1942 | hypothetical protein SORBIDRAFT_04g038510 [Sorghum bicolor] |
Metabolic Pathways | |||
---|---|---|---|
Pathway Name | Reaction | EC | Protein Name |
callose biosynthesis | 13-BETA-GLUCAN-SYNTHASE-RXN | EC-2.4.1.34 | 1,3-β-glucan synthase |