y
Basic Information | |
---|---|
Species | Brassica rapa |
Cazyme ID | Bra005239 |
Family | GT48 |
Protein Properties | Length: 1910 Molecular Weight: 218759 Isoelectric Point: 8.4749 |
Chromosome | Chromosome/Scaffold: 05 Start: 4226104 End: 4239912 |
Description | glucan synthase-like 8 |
View CDS |
External Links |
---|
NCBI Taxonomy |
CAZyDB |
Signature Domain Download full data set without filtering | |||
---|---|---|---|
Family | Start | End | Evalue |
GT48 | 1038 | 1764 | 0 |
VPKNLEARRRLEFFTNSLFMDMPQAKPVAEMVPFSVFTPYYSETVIYSSSELRSENEDGISTLFYLQKIFPDEWENFLERIGRSDSTGDADLQESATDAL ELRFWVSFRGQTLARTVRGMMYYRRALMLQCFLERRGLGVDDFSLTNMPRGFEASPEARAQADLKFTYVVSCQIYGQQKQQKKPEATDIALLLQRFEALR VAFIHSEDVGVEGKKEFYSKLVKADIHGKDQEIYSIKLPGDPKLGEGKPENQNHAIVFTRGEAIQTIDMNQDNYLEEAIKMRNLLEEFHGKHGIRRPTIL GVREHVFTGSVSSLAWFMSNQETSFVTLGQRVLAYPLKVRMHYGHPDVFDRVFHITRGGISKASRVINISEDIYAGFNSTLRQGNITHHEYIQVGKGRDV GLNQIALFEGKVAGGNGEQVLSRDVYRIGQLFDFFRMMSFYFTTVGFYVCTMMTVLTVYVFLYGRVYLAFSGSDRAISRVAKLSGNTALDAALNAQFLVQ IGVFTAVPMVMGFILELGLLKAIFSFITMQFQLCSVFFTFSLGTRTHYFGRTILHGGAKYRATGRGFVVQHIKFADNYRLYSRSHFVKAFEVALLLIVYI AYGYTDGGAVSFVLLTISSWFLVISWLFAPYIFNPSGFEWQKTVEDFDNWVSWLMYKGGVGVKGELSWESWWEEEQMHIQTLRGRILETILSLRFFMFQY GVVYKLNLTAKDTSLALYGYSWIVLVA |
Full Sequence |
---|
Protein Sequence Length: 1910 Download |
MARVYSNWDR LVRATLRREQ LRDSGQGHER VNSGLAGAVP PSLGRATNID AILQAADEIQ 60 AEDPNVARIL CEQAYSMAQN LDPNSDGRGV LQFKTGLMSV IKQKLAKRDG ASINRDRDIE 120 RLWQFYQLYK RRHRVDDIQR EEQKWRESGT AFSSNVGEIL KMRKVFATLR ALVEVLEVLS 180 RDADPNGVGR SIREELGRIK KADATLSAEL TPYNIVPLEA QSMTNAISVF PEVRGAIQAI 240 RYTEHFPKLP DDYEISGQRD ADMFDLLEYI FGFQKDNVRN QREHLVLTLS NAQSQLGLPS 300 PNDPKIDEKA VNEVFLKVLD NYIKWCKYLR IRLVYNKLEA INRDRKLFLV SLYFLIWGEA 360 ANVRFLPECI CYIFHNMAKE LDAKLDHGEA VRADSCVIEN GSVSFLDRVI SPIYAAMSAE 420 TLRNNNGKAA HSEWRNYDDF NEYFWTPGCF ELSWPMKTES KFLTGPKGRK RTGKSSFVEH 480 RTYLHLFRSF HRLWIFMVIM FQALAIIAFR KEHLDKDTFK ILLSAGATYA IMNFIESFLD 540 VVLMYGAYSM ARGMAISRVF IKFFWWGLGS VFVVYVYVQV LQERNKRTSD EFFYRLYILV 600 LGSYAAVRLI FGLLVKLPAC HALSEMSDQS FFQFFKWIYQ ERYFVGRGLF ENISDYCRYV 660 AFWLIVLASK FTFAYFLQAR MFLQLYIFAT IKPLVKPTKT IIDLPSFEYS WHDIVSKSND 720 HALTIVSLWA PVVCIYLMDI HIWYTLLSAI IGGVMGAKAR LGEIRSIEMV HKRFESFPEA 780 FAKNLVSPVV KRVSFGQHTS QDGQDMNKAY AAMFSPFWNE IIKSLREEDY ISNREMDLLS 840 IPSNTGSLGL VQWPLFLLCS KILVAIDLAM ECTETQGVLW RQICDDEYMA YAVQECYYSV 900 QNILNSMVDG VGRRWVERVF MEISNSIQEG SLAITLNLKK LQLVVSRFTA LTGLLIRNET 960 PALAKGAAKA MFDFYEVVTH DLLAENLRDQ LDTWNILARA RNEGSLFSNI EWPRDPEIIE 1020 QVKRLHLLLT VKDAAANVPK NLEARRRLEF FTNSLFMDMP QAKPVAEMVP FSVFTPYYSE 1080 TVIYSSSELR SENEDGISTL FYLQKIFPDE WENFLERIGR SDSTGDADLQ ESATDALELR 1140 FWVSFRGQTL ARTVRGMMYY RRALMLQCFL ERRGLGVDDF SLTNMPRGFE ASPEARAQAD 1200 LKFTYVVSCQ IYGQQKQQKK PEATDIALLL QRFEALRVAF IHSEDVGVEG KKEFYSKLVK 1260 ADIHGKDQEI YSIKLPGDPK LGEGKPENQN HAIVFTRGEA IQTIDMNQDN YLEEAIKMRN 1320 LLEEFHGKHG IRRPTILGVR EHVFTGSVSS LAWFMSNQET SFVTLGQRVL AYPLKVRMHY 1380 GHPDVFDRVF HITRGGISKA SRVINISEDI YAGFNSTLRQ GNITHHEYIQ VGKGRDVGLN 1440 QIALFEGKVA GGNGEQVLSR DVYRIGQLFD FFRMMSFYFT TVGFYVCTMM TVLTVYVFLY 1500 GRVYLAFSGS DRAISRVAKL SGNTALDAAL NAQFLVQIGV FTAVPMVMGF ILELGLLKAI 1560 FSFITMQFQL CSVFFTFSLG TRTHYFGRTI LHGGAKYRAT GRGFVVQHIK FADNYRLYSR 1620 SHFVKAFEVA LLLIVYIAYG YTDGGAVSFV LLTISSWFLV ISWLFAPYIF NPSGFEWQKT 1680 VEDFDNWVSW LMYKGGVGVK GELSWESWWE EEQMHIQTLR GRILETILSL RFFMFQYGVV 1740 YKLNLTAKDT SLALYGYSWI VLVAVVLLFK LFWYSPRKSS NILLALRFLQ GVVSLVVIAL 1800 IALAIALTDL SIPDMFACVL GFIPTGWAIL SLAITWKRLI KLFGLWETVR EFGRIYDAAM 1860 GMLIFAPIAL LSWFPFISTF QSRLLFNQAF SRGLEISIIL AGNRANVET* 1920 |
Functional Domains Download unfiltered results here | ||||||||
---|---|---|---|---|---|---|---|---|
Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam14288 | FKS1_dom1 | 1.0e-49 | 344 | 457 | 115 | + 1,3-beta-glucan synthase subunit FKS1, domain-1. The FKS1_dom1 domain is likely to be the 'Class I' region just N-terminal to the first set of transmembrane helices that is involved in 1,3-beta-glucan synthesis itself. This family is found on proteins with family Glucan_synthase, pfam02364. | ||
pfam02364 | Glucan_synthase | 0 | 1038 | 1750 | 794 | + 1,3-beta-glucan synthase component. This family consists of various 1,3-beta-glucan synthase components including Gls1, Gls2 and Gls3 from yeast. 1,3-beta-glucan synthase EC:2.4.1.34 also known as callose synthase catalyzes the formation of a beta-1,3-glucan polymer that is a major component of the fungal cell wall. The reaction catalyzed is:- UDP-glucose + {(1,3)-beta-D-glucosyl}(N) <=> UDP + {(1,3)-beta-D-glucosyl}(N+1). |
Gene Ontology | |
---|---|
GO Term | Description |
GO:0000148 | 1,3-beta-D-glucan synthase complex |
GO:0003843 | 1,3-beta-D-glucan synthase activity |
GO:0006075 | (1->3)-beta-D-glucan biosynthetic process |
GO:0016020 | membrane |
Annotations - NR Download unfiltered results here | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ACV04899.1 | 0 | 1 | 1909 | 1 | 1904 | callose synthase 10 [Arabidopsis thaliana] |
GenBank | EEC79862.1 | 0 | 3 | 1908 | 15 | 1946 | hypothetical protein OsI_21355 [Oryza sativa Indica Group] |
RefSeq | NP_850271.4 | 0 | 1 | 1909 | 1 | 1909 | GSL8 (GLUCAN SYNTHASE-LIKE 8); 1,3-beta-glucan synthase/ transferase, transferring glycosyl groups [Arabidopsis thaliana] |
RefSeq | XP_002322219.1 | 0 | 1 | 1908 | 1 | 1899 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002511263.1 | 0 | 1 | 1908 | 1 | 1875 | transferase, transferring glycosyl groups, putative [Ricinus communis] |
Metabolic Pathways | |||
---|---|---|---|
Pathway Name | Reaction | EC | Protein Name |
callose biosynthesis | 13-BETA-GLUCAN-SYNTHASE-RXN | EC-2.4.1.34 | 1,3-β-glucan synthase |