y
Basic Information | |
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Species | Arabidopsis lyrata |
Cazyme ID | 878725 |
Family | GT48 |
Protein Properties | Length: 1956 Molecular Weight: 226111 Isoelectric Point: 9.2283 |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GT48 | 1059 | 1806 | 0 |
VPSNLEARRRLTFFSNSLFMDMPAAPKIRNMLSFSVLTPYFSEDVLFSISGLEQQNEDGVSILFYLQKIFPDEWTNFLERVKCGSEEELRAREDLEEELR LWASYRGQTLTKTVRGMMYYRKALELQAFLDMAKDEELLKGYKALELTSEEASKSGGSLWAQCQALADMKFTFVVSCQQYSIHKRSGDQRAKDILRLMTT YPSIRVAYIDEVEQTHKESYKGTEEKIYYSALVKAAPQTKPMDSSESVQTLDQLIYRIKLPGPAILGEGKPENQNHAIIFTRGEGLQTIDMNQDNYMEEA FKMRNLLQEFLEKHGGVRCPTILGLREHIFTGSVSSLAWFMSNQENSFVTIGQRVLASPLKVRFHYGHPDIFDRLFHLTRGGICKASKVINLSFNSTLRE GNVTHHEYIQVGKGRDVGLNQISMFEAKIANGNGEQTLSRDLYRLGHRFDFFRMLSCYFTTIGFYFSTMLTVLTVYVFLYGRLYLVLSGLEEGLSNQRAF RNNKPLEAALASQSFVQIGFLMALPMMMEIGLERGFHNALIEFVLMQLQLASVFFTFQLGTKTHYYGRTLFHGGAEYRGTGRGFVVFHAKFAENYRFYSR SHFVKGLELMILLLVYQIFGQSYRGVVTYILITVSIWFMVVTWLFAPFLFNPSGFEWQKIVDDWTDWNKWIYNRGGIGVPPEKSWESWWEKELEHLRHSG VRGIILEIFLALRFFIFQYGLVYHLSTFKGKNQSFWVYGASWFVILFI |
Full Sequence |
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Protein Sequence Length: 1956 Download |
MTWQFLLTVG SLGEAMLDSE VVPSSLVEIA PILRVANEVE ASNPRVAYLC RFYAFEKAHR 60 LDPTSSGRGV RQFKTALLQR LERENETTLA GRQKSDAREM QSFYQHYYKK YIQALLNAAD 120 KADRAQLTKA YQTAAVLFEV LKAVNQTEDV EVADEILETH NKVEEKTQIY VPYNILPLDP 180 DSQNQAIMRL PEIQAAVAAL RNTRGLPWTA GHKKKLDEDI LDWLQSMFGF QKDNVSNQRE 240 HLILLLANVH IRQFPKPDQQ PKLDDRALTI VMKKLFRNYK KWCKYLGRKS SLWLPTIQQE 300 VQQRKLLYMG LYLLIWGEAA NLRFMPECLC YIYHHMAFEL YGMLAGSVSP MTGEHVKPAY 360 GGDDEAFLQK VVTPIYQTIA KEAKRSRGGK SKHSVWRNYD DLNEYFWSIR CFRLGWPMRA 420 DADFFCHTAE ELRIERSEIK SNSGDRWMGK VNFVEIRSFW HIFRSFDRMW SFYILCLQAM 480 IVIAWNGSGE LSAIFQGDVF LKVLSVFITA AVLKLAQAVL DIALSWKARH SMSLYVKLRY 540 VMKVGAAAVW VVVMPVTYAY SWKNASGFAL TIKNWFGGHS HNSPSLFIVA ILIYLSPNML 600 SALLFLFPFI RRYLERSDFK IMMLMMWWSQ PRLYIGRGMH ESALSLFKYT MFWIVLLISK 660 LAFSYYAEIK PLVGPTKDIM RIHISVYSWH EFFPHAKNNI GVVIALWSPV ILVYFMDTQI 720 WYAIVSTLVG GLNGAFRRLG EIRTLGMLRS RFQSIPGAFN DCLVPHDKSE DTKKKGFRAT 780 FSRKFDQLPS SKDKEAARFA QMWNKIISSF REEDLISDRE MELLLVPYWS DPDLDLIRWP 840 PFLLASKIPI ALDMAKDSNG KDRELKKRLA VDSYMTCAVR ECYASFKNLI NYLVVGEREG 900 QVINDIFSKI DEHIEKETLI TELNLSALPD LYGQFVRLIE YLLENREEDK DQIVIVLLNM 960 LEVVTRDIME EEVPSLLETA HNGSYVKYDV MTPLHQQRKY FSQLRFPVYS QTEAWKEKAS 1020 LFHLSHSCFH HSGAFDLFGM RNIKRLHLLL TVKESAMDVP SNLEARRRLT FFSNSLFMDM 1080 PAAPKIRNML SFSVLTPYFS EDVLFSISGL EQQNEDGVSI LFYLQKIFPD EWTNFLERVK 1140 CGSEEELRAR EDLEEELRLW ASYRGQTLTK TVRGMMYYRK ALELQAFLDM AKDEELLKGY 1200 KALELTSEEA SKSGGSLWAQ CQALADMKFT FVVSCQQYSI HKRSGDQRAK DILRLMTTYP 1260 SIRVAYIDEV EQTHKESYKG TEEKIYYSAL VKAAPQTKPM DSSESVQTLD QLIYRIKLPG 1320 PAILGEGKPE NQNHAIIFTR GEGLQTIDMN QDNYMEEAFK MRNLLQEFLE KHGGVRCPTI 1380 LGLREHIFTG SVSSLAWFMS NQENSFVTIG QRVLASPLKV RFHYGHPDIF DRLFHLTRGG 1440 ICKASKVINL SFNSTLREGN VTHHEYIQVG KGRDVGLNQI SMFEAKIANG NGEQTLSRDL 1500 YRLGHRFDFF RMLSCYFTTI GFYFSTMLTV LTVYVFLYGR LYLVLSGLEE GLSNQRAFRN 1560 NKPLEAALAS QSFVQIGFLM ALPMMMEIGL ERGFHNALIE FVLMQLQLAS VFFTFQLGTK 1620 THYYGRTLFH GGAEYRGTGR GFVVFHAKFA ENYRFYSRSH FVKGLELMIL LLVYQIFGQS 1680 YRGVVTYILI TVSIWFMVVT WLFAPFLFNP SGFEWQKIVD DWTDWNKWIY NRGGIGVPPE 1740 KSWESWWEKE LEHLRHSGVR GIILEIFLAL RFFIFQYGLV YHLSTFKGKN QSFWVYGASW 1800 FVILFILLIV KGLGVGRRRF STTFQLLFRI IKGLVFLTFV AILITFLALP LITIRDLFIC 1860 MLAFMPTGWG MLLIAQACKP LILQLGIWSS VRTLARGYEI VMGLLLFTPV AFLAWFPFVS 1920 EFQTRMLFNQ AFSRGLQISR ILGGQRKDRS SKNKE* 1980 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam04652 | DUF605 | 6.0e-13 | 29 | 142 | 122 | + Vta1 like. Vta1 (VPS20-associated protein 1) is a positive regulator of Vps4. Vps4 is an ATPase that is required in the multivesicular body (MVB) sorting pathway to dissociate the endosomal sorting complex required for transport (ESCRT). Vta1 promotes correct assembly of Vps4 and stimulates its ATPase activity through its conserved Vta1/SBP1/LIP5 region. | ||
pfam14288 | FKS1_dom1 | 1.0e-55 | 303 | 419 | 118 | + 1,3-beta-glucan synthase subunit FKS1, domain-1. The FKS1_dom1 domain is likely to be the 'Class I' region just N-terminal to the first set of transmembrane helices that is involved in 1,3-beta-glucan synthesis itself. This family is found on proteins with family Glucan_synthase, pfam02364. | ||
pfam02364 | Glucan_synthase | 0 | 1059 | 1815 | 826 | + 1,3-beta-glucan synthase component. This family consists of various 1,3-beta-glucan synthase components including Gls1, Gls2 and Gls3 from yeast. 1,3-beta-glucan synthase EC:2.4.1.34 also known as callose synthase catalyzes the formation of a beta-1,3-glucan polymer that is a major component of the fungal cell wall. The reaction catalyzed is:- UDP-glucose + {(1,3)-beta-D-glucosyl}(N) <=> UDP + {(1,3)-beta-D-glucosyl}(N+1). |
Gene Ontology | |
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GO Term | Description |
GO:0000148 | 1,3-beta-D-glucan synthase complex |
GO:0003843 | 1,3-beta-D-glucan synthase activity |
GO:0006075 | (1->3)-beta-D-glucan biosynthetic process |
GO:0016020 | membrane |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | AAD30609.1 | 0 | 8 | 1955 | 21 | 1878 | AC007153_1 Highly similar to putative callose synthase catalytic subunit [Arabidopsis thaliana] |
GenBank | AAK37413.1 | 0 | 8 | 1955 | 21 | 1950 | AF237733_1 callose synthase 1 catalytic subunit [Arabidopsis thaliana] |
RefSeq | NP_563743.2 | 0 | 8 | 1955 | 21 | 1950 | CALS1 (CALLOSE SYNTHASE 1); 1,3-beta-glucan synthase/ transferase, transferring glycosyl groups [Arabidopsis thaliana] |
RefSeq | NP_850178.1 | 0 | 8 | 1955 | 21 | 1959 | ATGSL03 (GLUCAN SYNTHASE-LIKE 3); 1,3-beta-glucan synthase/ transferase, transferring glycosyl groups [Arabidopsis thaliana] |
Swiss-Prot | Q9SL03 | 0 | 8 | 1955 | 21 | 1951 | CALS2_ARATH RecName: Full=Callose synthase 2; AltName: Full=1,3-beta-glucan synthase; AltName: Full=Protein GLUCAN SYNTHASE-LIKE 3 |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 2lxm_A | 0.008 | 33 | 152 | 21 | 139 | B Chain B, Lip5-chmp5 |