y
Basic Information | |
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Species | Panicum virgatum |
Cazyme ID | Pavirv00015127m |
Family | CE13 |
Protein Properties | Length: 414 Molecular Weight: 45455 Isoelectric Point: 8.3959 |
Chromosome | Chromosome/Scaffold: 042060 Start: 518 End: 4443 |
Description | Pectinacetylesterase family protein |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CE13 | 45 | 392 | 0 |
VFVGLTLIQSAAAKGAVCLDGSLPGYHLHRGFGSGANSWLVNLEGGGWCNDVSSCVFCKSSRRGSSNHMERQLQFTGIMSNRPEENPDFYNWNRVKVRYC DGGSFTGDSSNAAAGLYFRGQRIWQAAMDDLMAQGMRYANQALLAGCSAGGVSTILHCDEFRGLFPSNTKVKCLADAGMFLDTVDVSGRREMRSFFNGIV RLQGSGRSLPRSCTSRMDKTSCFFPQNVVPNIQTPTFILNTAYDVWQLQQSVAPKTADPQGLWSKCRTNHAYCNSNQLQFLQGFRNQMLDSVRGFSASRQ NGVFINSCFAHCQSERQDTWYTNNSPRLGNKRIAEAVGDWFFGRGDAK |
Full Sequence |
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Protein Sequence Length: 414 Download |
MASRVVAVIL VAVLVGASAA HGSEPWWNET QVYGTNANSG RSTGVFVGLT LIQSAAAKGA 60 VCLDGSLPGY HLHRGFGSGA NSWLVNLEGG GWCNDVSSCV FCKSSRRGSS NHMERQLQFT 120 GIMSNRPEEN PDFYNWNRVK VRYCDGGSFT GDSSNAAAGL YFRGQRIWQA AMDDLMAQGM 180 RYANQALLAG CSAGGVSTIL HCDEFRGLFP SNTKVKCLAD AGMFLDTVDV SGRREMRSFF 240 NGIVRLQGSG RSLPRSCTSR MDKTSCFFPQ NVVPNIQTPT FILNTAYDVW QLQQSVAPKT 300 ADPQGLWSKC RTNHAYCNSN QLQFLQGFRN QMLDSVRGFS ASRQNGVFIN SCFAHCQSER 360 QDTWYTNNSP RLGNKRIAEA VGDWFFGRGD AKYTDCAYPC DNTCHHLVFR GDH* 420 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam03283 | PAE | 0 | 42 | 392 | 353 | + Pectinacetylesterase. |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CBI39680.1 | 0 | 46 | 410 | 1 | 365 | unnamed protein product [Vitis vinifera] |
RefSeq | NP_001060382.1 | 0 | 1 | 413 | 7 | 411 | Os07g0634600 [Oryza sativa (japonica cultivar-group)] |
RefSeq | NP_001141895.1 | 0 | 1 | 413 | 1 | 413 | hypothetical protein LOC100274042 [Zea mays] |
RefSeq | XP_002279030.1 | 0 | 39 | 410 | 52 | 423 | PREDICTED: hypothetical protein isoform 1 [Vitis vinifera] |
RefSeq | XP_002461086.1 | 0 | 1 | 413 | 1 | 414 | hypothetical protein SORBIDRAFT_02g040470 [Sorghum bicolor] |