y
Basic Information | |
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Species | Brassica rapa |
Cazyme ID | Bra009909 |
Family | CE13 |
Protein Properties | Length: 418 Molecular Weight: 46787.4 Isoelectric Point: 8.8982 |
Chromosome | Chromosome/Scaffold: 06 Start: 18005094 End: 18007442 |
Description | Pectinacetylesterase family protein |
View CDS |
External Links |
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NCBI Taxonomy |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CE13 | 51 | 399 | 0 |
PLMVGLTLIRGAGAKGAVCLDGTLPGYHLHRGHGSGANSWLIQLEGGGWCDNIRNCVYRKKSRRGSSNYMEKQIQFTGILSDKAQQNPDFFNWNRVKLRY CDGGSFSGDSQNKAARLQFRGERIWRAAMDDLKAKGMRYAKQALLSGCSAGGLAVILRCDEFRNLFPGSTRIKCLSDAGLFLDTPDVSGGHTIRKLYNGV VQLQGVRNNLPHMCTNHLNPTSCFFPQNLISQMKTPLFIVNAAYDIWQIQSSIAPTSADPHGYWHECRLNHGRCNAAQLRFLQGFRNQMLRAVTGFSKSR KNGLFINSCFAHCQTERQDTWFADDSPVIHKKAVAIAVGDWYFDRAEVK |
Full Sequence |
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Protein Sequence Length: 418 Download |
MRNLFLLGVV VVTGLVLGTE ANEYLEFNVT ELDRIEELEY GFSKSSSNFN PLMVGLTLIR 60 GAGAKGAVCL DGTLPGYHLH RGHGSGANSW LIQLEGGGWC DNIRNCVYRK KSRRGSSNYM 120 EKQIQFTGIL SDKAQQNPDF FNWNRVKLRY CDGGSFSGDS QNKAARLQFR GERIWRAAMD 180 DLKAKGMRYA KQALLSGCSA GGLAVILRCD EFRNLFPGST RIKCLSDAGL FLDTPDVSGG 240 HTIRKLYNGV VQLQGVRNNL PHMCTNHLNP TSCFFPQNLI SQMKTPLFIV NAAYDIWQIQ 300 SSIAPTSADP HGYWHECRLN HGRCNAAQLR FLQGFRNQML RAVTGFSKSR KNGLFINSCF 360 AHCQTERQDT WFADDSPVIH KKAVAIAVGD WYFDRAEVKL IDCPYPCDRS CHNLVFR* 420 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam03283 | PAE | 0 | 38 | 401 | 366 | + Pectinacetylesterase. |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | AAC13595.1 | 0 | 1 | 417 | 1 | 422 | similar to Vigna radiata pectinacetylesterase precursor (GB:X99348) [Arabidopsis thaliana] |
GenBank | AAF26093.1 | 0 | 1 | 417 | 1 | 371 | AC012393_19 putative pectinacetylesterase [Arabidopsis thaliana] |
DDBJ | BAH19826.1 | 0 | 1 | 417 | 1 | 416 | AT5G26670 [Arabidopsis thaliana] |
RefSeq | NP_566263.1 | 0 | 1 | 417 | 1 | 415 | pectinacetylesterase, putative [Arabidopsis thaliana] |
RefSeq | NP_850878.2 | 0 | 1 | 417 | 1 | 416 | pectinacetylesterase, putative [Arabidopsis thaliana] |