y
Basic Information | |
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Species | Panicum virgatum |
Cazyme ID | Pavirv00008793m |
Family | CE13 |
Protein Properties | Length: 438 Molecular Weight: 48887.5 Isoelectric Point: 8.6149 |
Chromosome | Chromosome/Scaffold: 005145 Start: 11717 End: 16314 |
Description | Pectinacetylesterase family protein |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CE13 | 65 | 414 | 0 |
ALVGLTLVRRAQEKGALCLDGSAPGYHLQRGSGTGSQSWIIHLEGGGWCRNLKSCASRQRSMLGSSRYMERQVEFTGILSDDKSQNPDFYNWNKVKIRYC DGASFSGNVKEELQNGTRFYFRGQRIWEAVMNELVFKGLRNAKQAFLTGCSAGGLATYIHCDAFRALLPKDSRVKCLADGGFFLDIEDISGKRTMQSFYS DVVRLQGLRERFSHCNSKMEPGQCFFPHEVVKHIVNPVFILNPAYDAWQVQHALAPEASDPQHSWLDCRLDIAKCSSEQLEILQGFRKELHDAIREVNQK RDWGFYINSCYVHCQSLNSVTWHSPTSPRVNNKSIAEAVGDWFFDRREVK |
Full Sequence |
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Protein Sequence Length: 438 Download |
MPPSSASAPA SHHLRLWLRR RGRAGAAGAT FSVALLAAAL LLTLSYYASA PLASDSAAAA 60 GRSPALVGLT LVRRAQEKGA LCLDGSAPGY HLQRGSGTGS QSWIIHLEGG GWCRNLKSCA 120 SRQRSMLGSS RYMERQVEFT GILSDDKSQN PDFYNWNKVK IRYCDGASFS GNVKEELQNG 180 TRFYFRGQRI WEAVMNELVF KGLRNAKQAF LTGCSAGGLA TYIHCDAFRA LLPKDSRVKC 240 LADGGFFLDI EDISGKRTMQ SFYSDVVRLQ GLRERFSHCN SKMEPGQCFF PHEVVKHIVN 300 PVFILNPAYD AWQVQHALAP EASDPQHSWL DCRLDIAKCS SEQLEILQGF RKELHDAIRE 360 VNQKRDWGFY INSCYVHCQS LNSVTWHSPT SPRVNNKSIA EAVGDWFFDR REVKEIDCEY 420 PCNPTCHNLV FTKPFKI* 480 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam03283 | PAE | 0 | 68 | 416 | 350 | + Pectinacetylesterase. |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ACE86391.1 | 0 | 57 | 437 | 54 | 435 | pectinacetylesterase family protein [Sorghum bicolor] |
GenBank | EEC78390.1 | 0 | 2 | 436 | 4 | 436 | hypothetical protein OsI_18172 [Oryza sativa Indica Group] |
GenBank | EEE62081.1 | 0 | 2 | 436 | 4 | 436 | hypothetical protein OsJ_16865 [Oryza sativa Japonica Group] |
RefSeq | NP_001045555.1 | 0 | 54 | 436 | 46 | 428 | Os01g0974500 [Oryza sativa (japonica cultivar-group)] |
RefSeq | XP_002439150.1 | 0 | 57 | 437 | 54 | 434 | hypothetical protein SORBIDRAFT_09g001350 [Sorghum bicolor] |