y
Basic Information | |
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Species | Picea abies |
Cazyme ID | MA_10333321g0010 |
Family | CE13 |
Protein Properties | Length: 264 Molecular Weight: 29266.2 Isoelectric Point: 5.8802 |
View CDS |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CE13 | 2 | 142 | 0 |
NSWLVHMEGGGWCNNITSCFKRAQSRLGSSVYMAGKLAFSGILGDNQTQNPDFYNWNRVKIRYCDGASFTGDMQEVNEIYKLYYRGQRIWQAVIDNLLRK GMDKAEQTLLSGCSAGGLTSFLHCDNFKELLPKAAEGRKDS |
Full Sequence |
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Protein Sequence Length: 264 Download |
ENSWLVHMEG GGWCNNITSC FKRAQSRLGS SVYMAGKLAF SGILGDNQTQ NPDFYNWNRV 60 KIRYCDGASF TGDMQEVNEI YKLYYRGQRI WQAVIDNLLR KGMDKAEQTL LSGCSAGGLT 120 SFLHCDNFKE LLPKAAEGRK DSKTVEILTT GKEGLENSGD FSAGRFQAVL LSMGTMHSQF 180 GHPAHALVAL TEAIQEAQQA SDNSCLAHIL AALCYLLLRL VLLATQEDLI QLYLLGLTLE 240 QGLHWQFSSS YLYSLEDVST GQLT 300 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam12862 | Apc5 | 1.0e-7 | 158 | 205 | 48 | + Anaphase-promoting complex subunit 5. Apc5 is a subunit of the anaphase-promoting complex/cyclosome (APC/C) which is a multisubunit ubiquitin ligase that mediates the proteolysis of cell cycle proteins in mitosis and G1. Apc5, although it does not harbour a classical RNA binding domain, Apc5 binds the poly(A) binding protein (PABP), which directly binds the internal ribosome entry site (IRES) of growth factor 2 mRNA. PABP was found to enhance IRES-mediated translation, whereas Apc5 over-expression counteracted this effect. In addition to its association with the APC/C complex, Apc5 binds much heavier complexes and co-sediments with the ribosomal fraction. The N-terminus of Afi1 serves to stabilise the union between Apc4 and Apc5, both of which lie towards the bottom-front of the APC. This region of the Apc5 member proteins carries a TPR-like motif. | ||
pfam03283 | PAE | 6.0e-76 | 2 | 136 | 135 | + Pectinacetylesterase. |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ABK24433.1 | 0 | 2 | 137 | 65 | 200 | unknown [Picea sitchensis] |
GenBank | ABK24994.1 | 0 | 2 | 137 | 65 | 200 | unknown [Picea sitchensis] |
GenBank | ACG39759.1 | 0 | 1 | 137 | 61 | 197 | carboxylic ester hydrolase [Zea mays] |
RefSeq | NP_001151183.1 | 0 | 1 | 137 | 61 | 197 | LOC100284816 [Zea mays] |
RefSeq | XP_002454426.1 | 0 | 1 | 137 | 61 | 197 | hypothetical protein SORBIDRAFT_04g030720 [Sorghum bicolor] |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
DT639957 | 137 | 1 | 137 | 0 |
DR798343 | 137 | 1 | 137 | 0 |
DR791919 | 137 | 1 | 137 | 0 |
CO524837 | 137 | 1 | 137 | 0 |
BX249708 | 136 | 2 | 137 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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