y
Basic Information | |
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Species | Brassica rapa |
Cazyme ID | Bra013394 |
Family | CE13 |
Protein Properties | Length: 392 Molecular Weight: 42251.8 Isoelectric Point: 9.7824 |
Chromosome | Chromosome/Scaffold: 01 Start: 5390167 End: 5392977 |
Description | Pectinacetylesterase family protein |
View CDS |
External Links |
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NCBI Taxonomy |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CE13 | 23 | 371 | 0 |
AVPITYLQSAVAKGAVCLDGSAPAYHFDKGFGSGVNNWIVHMEGGGWCTDVASCIKRKGTMKGSSKFMNKDFGFSGILGGKQNTNPDFYNWNRIKVRYCD GSSFTGNVEAVNPANKLFFRGARVWRAVIDDLMAKGMKNAQNAILSGCSAGALAAILHCDTFRAILPRTARVKCVSDAGYFIHGKDISGGSYIQSYYSKV VALHGSAKSLPISCTSKMKPELCFFPQYVVPSMRTPLFVINAAFDSWQIKNVLAPTGVDKRKEWANCKLDLKKCSAAQLRTVQGFRDQMMRALSPIHSTP SRGLFLDSCHAHCQGGSAASWSGAKGPQVANTKISKAVGNWFYGRSAFQ |
Full Sequence |
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Protein Sequence Length: 392 Download |
MGKLKQCWSS VLVLSMVVIG TGAVPITYLQ SAVAKGAVCL DGSAPAYHFD KGFGSGVNNW 60 IVHMEGGGWC TDVASCIKRK GTMKGSSKFM NKDFGFSGIL GGKQNTNPDF YNWNRIKVRY 120 CDGSSFTGNV EAVNPANKLF FRGARVWRAV IDDLMAKGMK NAQNAILSGC SAGALAAILH 180 CDTFRAILPR TARVKCVSDA GYFIHGKDIS GGSYIQSYYS KVVALHGSAK SLPISCTSKM 240 KPELCFFPQY VVPSMRTPLF VINAAFDSWQ IKNVLAPTGV DKRKEWANCK LDLKKCSAAQ 300 LRTVQGFRDQ MMRALSPIHS TPSRGLFLDS CHAHCQGGSA ASWSGAKGPQ VANTKISKAV 360 GNWFYGRSAF QKIDCPSPIC NPTCPAISTD E* 420 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam03283 | PAE | 2.0e-170 | 24 | 373 | 350 | + Pectinacetylesterase. |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | AAM65412.1 | 0 | 1 | 391 | 1 | 391 | pectin acetylesterase [Arabidopsis thaliana] |
GenBank | ABK93778.1 | 0 | 11 | 390 | 14 | 393 | unknown [Populus trichocarpa] |
EMBL | CAA18628.1 | 0 | 1 | 391 | 1 | 362 | putative pectinacetylesterase protein [Arabidopsis thaliana] |
RefSeq | NP_199341.1 | 0 | 27 | 391 | 27 | 391 | pectinacetylesterase, putative [Arabidopsis thaliana] |
RefSeq | NP_567585.1 | 0 | 1 | 391 | 1 | 391 | pectinacetylesterase, putative [Arabidopsis thaliana] |