y
Basic Information | |
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Species | Brassica rapa |
Cazyme ID | Bra021961 |
Family | CE13 |
Protein Properties | Length: 392 Molecular Weight: 42133.3 Isoelectric Point: 8.6136 |
Chromosome | Chromosome/Scaffold: 02 Start: 17915065 End: 17917914 |
Description | Pectinacetylesterase family protein |
View CDS |
External Links |
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NCBI Taxonomy |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CE13 | 23 | 371 | 0 |
AVPITYLESAVAKGAVCLDGSAPAYHFDKGSGSGVNNWIVHMEGGGWCTDIATCVKRKTTMKGSSKFMNKDFGFSGILGGKQSTNPDFYNWNRIKVRYCD GSSFTGDIEAVDPTNKLFFRGARVWRAVIDDLMAKGMSNAQNAILSGCSAGALAAILHCDQFKSILPTTAKVKCVSDAGFFIHGKDISGGSYIESYYSKV VSTHGSAKSLPASCTSSMKPELCFFPQYVVKTMQTPLFVINAAFDSWQIKNVLAPTSVDKRKEWKDCKLDLKKCTAAQLQTVQGYRDQMLAALAPVQATT TRGLFLDSCHAHCQGGSAATWSGAQGPQVGNTKMAKAVGDWFYERSTFQ |
Full Sequence |
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Protein Sequence Length: 392 Download |
MVRLKQVWSS VMVLAVVVIG AGAVPITYLE SAVAKGAVCL DGSAPAYHFD KGSGSGVNNW 60 IVHMEGGGWC TDIATCVKRK TTMKGSSKFM NKDFGFSGIL GGKQSTNPDF YNWNRIKVRY 120 CDGSSFTGDI EAVDPTNKLF FRGARVWRAV IDDLMAKGMS NAQNAILSGC SAGALAAILH 180 CDQFKSILPT TAKVKCVSDA GFFIHGKDIS GGSYIESYYS KVVSTHGSAK SLPASCTSSM 240 KPELCFFPQY VVKTMQTPLF VINAAFDSWQ IKNVLAPTSV DKRKEWKDCK LDLKKCTAAQ 300 LQTVQGYRDQ MLAALAPVQA TTTRGLFLDS CHAHCQGGSA ATWSGAQGPQ VGNTKMAKAV 360 GDWFYERSTF QNIDCPSLNC NPTCPAVSTE D* 420 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam03283 | PAE | 7.0e-176 | 25 | 373 | 349 | + Pectinacetylesterase. |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | AAM65412.1 | 0 | 1 | 391 | 1 | 391 | pectin acetylesterase [Arabidopsis thaliana] |
EMBL | CAA18628.1 | 0 | 1 | 391 | 1 | 362 | putative pectinacetylesterase protein [Arabidopsis thaliana] |
RefSeq | NP_199341.1 | 0 | 27 | 391 | 27 | 391 | pectinacetylesterase, putative [Arabidopsis thaliana] |
RefSeq | NP_567585.1 | 0 | 1 | 391 | 1 | 391 | pectinacetylesterase, putative [Arabidopsis thaliana] |
RefSeq | XP_002328833.1 | 0 | 3 | 390 | 5 | 393 | predicted protein [Populus trichocarpa] |